Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1206 ATGAGCGTCATCGACCTCCTCACCAGAGTCGACTCCATTTGCAAGAAGTACGACAAGTACGACGTCGACAGGCAGAAGGACGCCAACATCTCCGGTGACGATGCCTTCGCCAGGCTCTACGCCGTCGTCGACGCTGACATCGAGGCTGCGCTTCAGAAAGCAGAACAAGCTTCGAAGGAGAAAGGTAAGGCATCTGCTGTAGCGATTAATGCGGAGATTCGTCGTACCAAGGCTAGATTACTGGAAGAGGTCCCTAAACTGCAGAGGCTGGCTATGAAAAAGGTAAAGGGGCTTTCATCGCAAGAATTTGCTGCCCGTAATGATCTAGTTCTTGCATTGCCAGAGAGGATACAAGCTATCCCAGACGGGACCCCTGCAGCACCCAAGCAAACTGGTGGTTGGACAGCTTCTGCATCACGTCCTGAAATCAAATTCGATTCTGATGGGCGATTTGATGATGAGTACTTCCAACAAACTGAGGAATCTAGCCGATTTAGGCAGGAGTATGAAATGCGTAGAATGAAACAGGATCAAGGTTTGGATGTGATAGCAGAAGGATTGGATACCTTGAAAAACATGGCATCTGATATGAACGAGGAAATGGATAGACAAGTTCCTCTGATGGATGAGATTGATACTAAGGTGGACAAAGCATCTTCTGACCTTAAGAATACCAATGTTAGACTTAAAGACACAGTGATGCAGCTTCGTTCCAGTCGAAACTTCTGTATTGATATTGTTTTGTTGATTATAATTTTGGGGATAGCTGCCTATCTCTATAACGTGCTAAAGAAGTGA 798 0.4612 MSVIDLLTRVDSICKKYDKYDVDRQKDANISGDDAFARLYAVVDADIEAALQKAEQASKEKGKASAVAINAEIRRTKARLLEEVPKLQRLAMKKVKGLSSQEFAARNDLVLALPERIQAIPDGTPAAPKQTGGWTASASRPEIKFDSDGRFDDEYFQQTEESSRFRQEYEMRRMKQDQGLDVIAEGLDTLKNMASDMNEEMDRQVPLMDEIDTKVDKASSDLKNTNVRLKDTVMQLRSSRNFCIDIVLLIIILGIAAYLYNVLKK* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1206 265 PANTHER SYNTAXIN-73 1 261 - -
Amo17g1206 265 Gene3D - 170 231 - -
Amo17g1206 265 MobiDBLite consensus disorder prediction 121 146 - -
Amo17g1206 265 CDD SNARE_Qc 175 230 - -
Amo17g1206 265 PANTHER SYNTAXIN 1 261 IPR045242 -
Amo17g1206 265 SUPERFAMILY SNARE fusion complex 165 230 - -
Amo17g1206 265 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 170 232 IPR000727 -
Amo17g1206 265 Pfam SNARE domain 207 256 IPR000727 -
Amo17g1206 265 Coils Coil 40 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1206 Amo-Chr17 34036526 34039786 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1206 1 264 SNARE and Associated Proteins AT3G09740 78.571 5.68e-158 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1206 K08506 - gmx:100819272 465.307