Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1197 ATGGGGAGAGGGAAGATCGCGATAAGAAGGATCGACAATTCCACGAGCAGGCAAGTGACTTCTCAAGCGAAGGAACGGTTTGTTGAAGAAGTTGGAGTTATGATCTTTTCCAGCACTGGCAAACTCTATGATTTCTCCAAACTAGATCAGCTTGGGAGTTCAACCTCTGAAGTTAAGTTTTGGCAACGGGAGGCGGCAATGCTAAGGCAACAATTGCTAAGTTTGCAAGAGAGTCACCCGGCAAATTATGGAGAAGAATTGTCAGGTTTGACAATCAAAGATTTACAGACTTTGGAGAACCAGTTGGAAATTAGCCTTCGAGGTGTCCGTACAAAAAAGATTCCATTTTTCATACTTTTTTGGTTCTTTTTATTTATTTTCTACAGGGGAACCTCTATACACCAAGAAAATGTGGACCTATACGAGAAGATAAACTTAATCCGTCAAGAAAACATGGAATTAAAAAAAGAAGAAAGTTTCACTAACCAGGTATATGTAACAAAAGATCAGAATGTGGAGAATAGAAATTCTGTCCTCACAAACAGTCTAGCCATAAAAGACGATTCTCAAGTTCCTGTGTTGCAGATTGCAGCTGCATTGATGCATTTACAGAGATGA 618 0.3964 MGRGKIAIRRIDNSTSRQVTSQAKERFVEEVGVMIFSSTGKLYDFSKLDQLGSSTSEVKFWQREAAMLRQQLLSLQESHPANYGEELSGLTIKDLQTLENQLEISLRGVRTKKIPFFILFWFFLFIFYRGTSIHQENVDLYEKINLIRQENMELKKEESFTNQVYVTKDQNVENRNSVLTNSLAIKDDSQVPVLQIAAALMHLQR* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1197 205 ProSiteProfiles K-box domain profile. 58 164 IPR002487 GO:0003700|GO:0005634|GO:0006355
Amo17g1197 205 PANTHER MADS-BOX TRANSCRIPTION FACTOR 23 ISOFORM X1 1 195 - -
Amo17g1197 205 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 195 - -
Amo17g1197 205 SUPERFAMILY SRF-like 2 49 IPR036879 GO:0003677|GO:0046983
Amo17g1197 205 Pfam K-box region 54 157 IPR002487 GO:0003700|GO:0005634|GO:0006355
Amo17g1197 205 ProSiteProfiles MADS-box domain profile. 1 49 IPR002100 GO:0003677|GO:0046983
Amo17g1197 205 Coils Coil 58 78 - -
Amo17g1197 205 SMART madsneu2 1 48 IPR002100 GO:0003677|GO:0046983
Amo17g1197 205 Coils Coil 137 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1197 Amo-Chr17 33488771 33497043 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1197 1 162 MADS-box Gene Family AT4G37940 47.895 3.15e-45 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1197 K09264 - pvy:116137676 209.149