Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1194 ATGGCTTCTTCTCTCACGGGAAAATCTAGAGAGGTTTCATCCCGGATCCCTGACAGTCGCGAACCTCGGCCAATTGGTGGTAGGAATTTCAAGGTCCTTATGGAAAATGAACGGATTAAAGTTGGCAATGTGCTCATGAAATCTGTGAGAGAAGCAGGTGCAACTTCGAGAAMGAGTGCTACAGTAGCTGGTAATCCTAAGGGAGGCTTCAAAAGTATGGATAAAAGCAATAGCAAATATGTTACTTCTGCAAATACAAATGTGAGAAAGGCATTGGCTGATGTTAGTAATGTTCAAGGAAACTCTGCAACAAATATTGGACGTGACAGCTCCAAAATGAAGGGTTTAGCAGGTTCAAACATTAAAAAAGGGGGTGGTATCACCTTGAGGAAATCCTTCACGGGAATACTGCAAAGAAATAGAAGCAATGATGTCCAGTCAGATGCTCCAAAGAAAGAACCAGGCACAGATGTGAGACCAGCTTCAAAGGATCAGAAGTATAATTCACATGGAGGCCCATCAGTTGTCACAAAAGACAGGTTTGCCAAGAAGCCTATATTACCTWCAAATCCAAGTAATTCAAGGAAGTCCTTACCAATACCAAGGAAGTCCTTACCAGCACCAAGGAAGGTATACAGAGCAGATGAAAGTGCTGGAAGTTCTGAAACAGCAAAGGCACGAAGTTCTCTCCCCTCTAAGGCAACAGCAAGTAGAAGAGTTAGTTCCCAGCTAACTAATGCAAGAAACAATGTGCGGAAGATACGAGTGAGTGATGGCTTTACTCAAACGAGTCAATCCAAAGTTTTATATGGATCTTCAAGGAAGTACATCATGCCTCTTAAGACTAAAGTCATCGCTTCTACTGATCACATGACTTTAAAACCTAAATGCATATCAGGTCAGAACATATCACAATCAAATGCTGCAATATTGTCTCAGGATGAGGAAGCACTTCCATTACCTCTTCCAGTGAATGGTTTAGCATCAGTTTCCAATGATGCAAATCAAGGATGTGTTCCATCTGATGGAGAGAAAAATTTGGGAGTACATTTGCCAGAACTCATTCTAATGAAAAAGTCAAGACGCAAAAAATCTTATACTAGTTCATTGATGGAAGGATCTAAGCTTCTCAAGCAAACGTGTGAAGTTAGCCAGCAGGATAACCTACCAAATATAGACAATGATTGCAATCATTTAGAAGTACCTGAATATGTTGATGACATATATCAGTACTATTGGGTTAGTGAGGCGCAAAATCCATCTTTGGCAAATTACATGTGCATTCAGACAGAAATTACACCTTATATGCGGGGCATTTTGATCAACTGGTTGATTGAAGTACACATGAAGTTTGATTTGATGCCAGAAACACTATATCTCACAGTTACATTATTAGATCAATATCTTTCCATGGTGAAAATAGAAAAGACAGATATGCAATTAGTTGGTCTTACAGCACTTTTGCTGGCTTCAAAATACGAGGACTTTTGGCATCCTAGAGTCAAAGATTTAATAAGCATCTCGGCTGAGTCATATACAAGAGATCAAATGCTTGGAATGGAGAAGCTTATTCTTAGAAAATTGAAGTTTCGTTTGAATGTTCCTACTCCTTATGTTTTCTTGGTGAGGGGTTGTGCCGAAATGATATTGAAACTCCATAAAGCTGCTAGSATTGGAAAGCTAAAGGTTACATATGAAAAGTACTCAAGAAAGGAGCTACGTTTGGTTGCAGCCGTAAGACCGTTGGATAGCCTTCCCTGA 1761 0.3981 MASSLTGKSREVSSRIPDSREPRPIGGRNFKVLMENERIKVGNVLMKSVREAGATSRXSATVAGNPKGGFKSMDKSNSKYVTSANTNVRKALADVSNVQGNSATNIGRDSSKMKGLAGSNIKKGGGITLRKSFTGILQRNRSNDVQSDAPKKEPGTDVRPASKDQKYNSHGGPSVVTKDRFAKKPILPXNPSNSRKSLPIPRKSLPAPRKVYRADESAGSSETAKARSSLPSKATASRRVSSQLTNARNNVRKIRVSDGFTQTSQSKVLYGSSRKYIMPLKTKVIASTDHMTLKPKCISGQNISQSNAAILSQDEEALPLPLPVNGLASVSNDANQGCVPSDGEKNLGVHLPELILMKKSRRKKSYTSSLMEGSKLLKQTCEVSQQDNLPNIDNDCNHLEVPEYVDDIYQYYWVSEAQNPSLANYMCIQTEITPYMRGILINWLIEVHMKFDLMPETLYLTVTLLDQYLSMVKIEKTDMQLVGLTALLLASKYEDFWHPRVKDLISISAESYTRDQMLGMEKLILRKLKFRLNVPTPYVFLVRGCAEMILKLHKAAXIGKLKVTYEKYSRKELRLVAAVRPLDSLP* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1194 586 MobiDBLite consensus disorder prediction 145 164 - -
Amo17g1194 586 SMART cyclin_7 442 526 IPR013763 -
Amo17g1194 586 MobiDBLite consensus disorder prediction 221 249 - -
Amo17g1194 586 MobiDBLite consensus disorder prediction 132 249 - -
Amo17g1194 586 Gene3D - 421 533 - -
Amo17g1194 586 PANTHER CYCLINS 170 543 IPR039361 -
Amo17g1194 586 MobiDBLite consensus disorder prediction 1 28 - -
Amo17g1194 586 Gene3D - 407 545 - -
Amo17g1194 586 Pfam Cyclin, N-terminal domain 407 533 IPR006671 -
Amo17g1194 586 PANTHER CYCLIN-B3-1-RELATED 542 584 - -
Amo17g1194 586 PANTHER CYCLIN-B3-1-RELATED 170 543 - -
Amo17g1194 586 PIRSF Cyclin_A_B_D_E 140 546 IPR039361 -
Amo17g1194 586 PIRSF Cyclin_A_B_D_E 542 585 IPR039361 -
Amo17g1194 586 PIRSF Cyclin_A_B_D_E 46 197 IPR039361 -
Amo17g1194 586 PANTHER CYCLINS 542 584 IPR039361 -
Amo17g1194 586 MobiDBLite consensus disorder prediction 57 77 - -
Amo17g1194 586 SUPERFAMILY Cyclin-like 397 533 IPR036915 -
Amo17g1194 586 CDD CYCLIN 436 525 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1194 Amo-Chr17 33052073 33060033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1194 532 586 Core Cell Cycle Gene Families AT1G16330 50.000 1.84e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1194 K21777 - gmx:100808850 521.546