Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1183 ATGGCTCCCGCCGTCGCCTCTGCTGCCGGCTCCCCCGACGTCTTCTCTTCCCTCGCTGCCCTCCACTCCAGCCAGTACCGCACCGGATTTGGCGCCATCCTCTCCACCGGTACCTTACTCTCCGCCCTCATTGTCGGATTCGTCGCCTTCTACGCCGCTCTGTTCTCCCTCGACCCCGTACCCTTCGTCAGAGACGTGCTCTTCTACTTGACGGCAACGATGTTCCTCTTCTACGTGTATCTTAGCGTGGAGATCTTCCTGTGGCAGGCGATTGGATTCGTAGGGTTTTATGCATTCTTTGTTGGTCTCATGTTCTATATGGACTTGGGAGTAGTTGATGGCAGAGGCAAGAGTGGGAATTCTTCCATAGATCTTGAGGAGCAGAAGGAATTAGTTGCGGTGCACATTGACTCCGATGCCAAGGTTTCAGGATCTATGAACAATGAGAAGCGCAGTTCTGGATTTCCGGGAGCTTATGGATTGATTCCTGTTGCAACTCTCAAACTGTCGATCCCCGAGCCAGCGCCGTCGCAATGGAGCAGACTTTACTCGTTGGCCAACATCGCTTTTTGTCCGATAGCCCTCTTGTATGCTTGCAAATCATTTGTGCCATTTGATCATCCCATAGCTTTCCTCTTCCCCAACACTGACTTGCCCCTCTGGTCAGTGGTGCTCACCACAAGCTTCTGCCTTGCATGCCTTCATTTAGTAATGGAAAAAGAACCTCCCAAAACTGAGCAAATACCTGTGGTTATCATGGCATTTGTTATGAGCTTGTTTTGGATATCTACCGCAGCTGGAGAACTGGTGAACTACCTTGAAACTTTAGGTCTAGCAAATGGTGGATTTATTATGAGTGCTAGCCATAATTCTGGAGGGCCGAAATATGATTGGGGTATTAAGAAGTGGGCACCCTGCTCCAGAATCCATTACTCTAGAATTAATTTGTTGGGTGATAAAAAGGATTCAGTGACAGCAAGTCAAACCCTGGATTTGACATCTGGTTTTGAAGTTGGCCCAACAACAAATGGTTCACGCGATGCGGTATCATGTCATAGTGCTCGGTCGGTGTTGACTATTGCCTTCCAGTTTCCTTTTGACAGTAGTCTGCAGGATAATGTTGCTGTCATGGCACGCCAGTACATCCGTAGTGTGATTTCCTCTGTGCAGAGGGTTGCCATGGCGATTTTTCCATCTGGTATAAACCCGGCAGTTGGCTCAAAACTCTCTCTTGGTTTTCCAGAGGCTCTTACACTAGCCAACTGGATCTACTGCAGTTATAGGCAATCGGTGCCGGTGTTCATCTTTGCAAACCAGGCTGGCCTTGACATGTTGGAAACAACTTTGGTGGCTTTACAAGACATCACATGGTGCCATGTATTAACTCCATCTTGTGAAGGCAGAGAAAGCTAG 1413 0.4869 MAPAVASAAGSPDVFSSLAALHSSQYRTGFGAILSTGTLLSALIVGFVAFYAALFSLDPVPFVRDVLFYLTATMFLFYVYLSVEIFLWQAIGFVGFYAFFVGLMFYMDLGVVDGRGKSGNSSIDLEEQKELVAVHIDSDAKVSGSMNNEKRSSGFPGAYGLIPVATLKLSIPEPAPSQWSRLYSLANIAFCPIALLYACKSFVPFDHPIAFLFPNTDLPLWSVVLTTSFCLACLHLVMEKEPPKTEQIPVVIMAFVMSLFWISTAAGELVNYLETLGLANGGFIMSASHNSGGPKYDWGIKKWAPCSRIHYSRINLLGDKKDSVTASQTLDLTSGFEVGPTTNGSRDAVSCHSARSVLTIAFQFPFDSSLQDNVAVMARQYIRSVISSVQRVAMAIFPSGINPAVGSKLSLGFPEALTLANWIYCSYRQSVPVFIFANQAGLDMLETTLVALQDITWCHVLTPSCEGRES* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1183 470 Pfam MEKHLA domain 423 463 IPR013978 -
Amo17g1183 470 Gene3D - 4 126 IPR044880 -
Amo17g1183 470 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 8 121 - -
Amo17g1183 470 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 164 277 - -
Amo17g1183 470 Pfam Sodium/calcium exchanger protein 5 104 IPR004837 GO:0016021|GO:0055085
Amo17g1183 470 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 8 121 - -
Amo17g1183 470 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 164 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1183 Amo-Chr17 32700962 32704049 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1183 5 277 Antiporters AT1G08960 57.597 2.63e-100 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1183 K13754 - gmx:100775437 363.229