Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1173 ATGGAAAAAATTTTATGTTATTCATTATTTTTGTTTCAAATTCATTTCCTTTTACATAGCAGCAGTGCCAATAATAATAATTACAACAAAAACAAGGTTCCAGCAATAATAGTGTTTGGAGACTCATCAGTTGATTCTGGTAACAACAACTTCATTCCAACAATTGCAAGGAGCAACTTTGAGCCATATGGGCGTGATTTTCCTGATGGAAACCCAACAGGAAGATTCTCAAATGGAAAAATTGCCCCTGATTTTATCTCTGAGGCCTTTGGTCTTATGCCAACTGTTCCAGCATACTTAGATCCGTCTTATAGTATTTCAGACTTTGCTAATGGTGTTTGTTTTGCATCTGCTGGAACTGGATTTGACAATGCTACTTCAAATGTTGTTGATGTGATACCTCTGTGGAAAGAAGTTGAGTACTACAAAGAGTACCAAAGAAAATTAAGGACACATCTTGGCGAGGAGAAAGCTAATGAGATATTCAAAGAAGCATTATATTTGGTTAGCATAGGTACAAATGATTTTCTAGAGAACTATTACACACTCCCTCAACGTAGGTGCCAATTCAAAGAAGTTCAACAATACGAGGATTTTCTAATTGGACTAGCAGAGAATTTTTTTAAGGAAATTTATCATCTTGGAGCAAGAAAAATTTCTCTGACAGGGTTGCCTCCTATGGGGTGTTTGCCATTGGAAAGAGCTATAAACATTATGGAATTTCATGGTTGCGTGGAAGAATACAATAACGTGGCTTTGGAATTTAATGGTAAATTAGGATGGTTAGTGAGTAAACTTAACAAGGACCTTCCTGGGCTTCAATTAGTTGATGCAAATGCATATGATATCCTATTGCAGATTGTTACACAGCCTTCTCGTTTTGGTTTTGAGGTTGCGCAAGTGGGATGTTGTGGAACAGGGAGATTTGAGATGAGTTACTTATGCGACCCAAAAAGTCCATTTACGTGCTCAGATGCAAATAAATATGTATTTTGGGATGCCTTTCACCCTTCGGAGAAAACAAGTCAGATAGTCTCTAACTATTTAATTGAAAAATATTTAGCAAAGTTCCGTTAA 1077 0.3649 MEKILCYSLFLFQIHFLLHSSSANNNNYNKNKVPAIIVFGDSSVDSGNNNFIPTIARSNFEPYGRDFPDGNPTGRFSNGKIAPDFISEAFGLMPTVPAYLDPSYSISDFANGVCFASAGTGFDNATSNVVDVIPLWKEVEYYKEYQRKLRTHLGEEKANEIFKEALYLVSIGTNDFLENYYTLPQRRCQFKEVQQYEDFLIGLAENFFKEIYHLGARKISLTGLPPMGCLPLERAINIMEFHGCVEEYNNVALEFNGKLGWLVSKLNKDLPGLQLVDANAYDILLQIVTQPSRFGFEVAQVGCCGTGRFEMSYLCDPKSPFTCSDANKYVFWDAFHPSEKTSQIVSNYLIEKYLAKFR* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1173 358 CDD SGNH_plant_lipase_like 34 353 IPR035669 -
Amo17g1173 358 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 7 357 - -
Amo17g1173 358 SUPERFAMILY SGNH hydrolase 164 351 - -
Amo17g1173 358 Pfam GDSL-like Lipase/Acylhydrolase 36 349 IPR001087 GO:0016788
Amo17g1173 358 PANTHER GDSL ESTERASE/LIPASE EXL3 7 357 - -
Amo17g1173 358 Gene3D SGNH hydrolase 21 355 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1173 Amo-Chr17 32525878 32532105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1173 9 351 Pollen Coat Proteome AT1G75910 35.072 3.91e-64 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1173 - - gmx:100819256 605.134