Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1171 ATGGATAATACAAGGTGTTGGTTTAATAGGTTCAAGTCAAAAGATAAAGTGCCGTCTACAAAACATAAGGATACTATGAGCACCGGAAAAGAAGGGTCAAGACCTCCAACAAACGAAGAAGCACCTTCCAGTGCAACCAAACAGAAGGTTGCAGCTGCGAAACAGTTCATAGAAAACCATTATAAAAAGCAGATGAAGGATCTGCAGGAGAGGAAGGAACGACGGAATATGCTTGAAAAGAAATTGGCTGATGCTGAAGTCTCCGAGGAAGAGCAGAACAACCTGCTTAAGTATTTTGAGAAAAAGGAGAGGGAATACATGCGCCTTCAGAGGCATAAGATGGGGGCTGATGATTTTGAACCCCTGACTATGATAGGGAAGGGTGCGTTTGGAGAGGTCAGGATCTGCCGTGAGAAAGCAACTGGTCATGTATATGCTATGAAGAAACTCAAGAAATCAGAGATGCTTCGCAGAGGGCAGGTTGAACATGTTAAAGCCGAGAGGAACTTACTTGCAGAAGTTGACAGCAATTGCATTGTAAAGCTTTATTATTCCTTTCAAGATGAAGAGTACTTATATCTCATCATGGAGTATCTACCTGGTGGTGATATGATGACGCTGCTCATGCGGAAGGATATACTGACAGAAGATGAGGCAAGGTTCTATGTAGGAGAGACTGTCCTTGCTATCGAGTCTATTCATAAACATAATTATATTCATCGGGATATCAAGCCTGACAATTTGCTGCTGGATAGAAATGGTCACATGAAATTATCAGATTTTGGATTATGTAAACCACTAGACTGCAGTAATCTTCAGGAAACAGATTTCTCTATGGGAAATAACAGAAGTGGTGCCCTTCGGAGTGATGGACGTCCTGTGGCTCCTAAAAGAACTCAACAAGAGCAACTGCAGCATTGGCAGAAAAATAGGCGAACACTTGCCTATTCTACGGTTGGAACACCTGACTATATTGCCCCTGAGGTTTTACTGAAGAAAGGATATGGCATGGAATGTGATTGGTGGTCTCTGGGAGCTATAATGTATGAAATGCTGGTGGGGTATCCACCCTTCTATTCCGATGAACCAATGTTGACTTGTAGAAAGATAGTAAATTGGAGAACTCATTTAAAATTTCCCGAAGAAGCTAAACTCTCGCCTGAGGCAATAGATCTTATTAGTCGACTTCTATGTAATGTGGAACAGAGGCTTGGAACCAAAGGAGCCTATGAAATAAAGGCTCACCCATGGTTCAAAGGTATTGAGTGGGACAAGTTGTACCAAATGAAAGCTGCTTTTATTCCTGAGGTCAATGGTGAATTAGATACTCAAAATTTCGAAAAGTTTGAGGAGTGCGATAACCAAACTCAACCTTCCTCAAAATCAGGCCCATGGAGAAAGATGCTGTCATCTAAGGACATTAACTTCGTCGGATACACATATAAGAACTATGAAATTGTGAATGATGATCAACTACCTGGAATTGCTGAGTTGAAGAAGAAGAACACAAAAACTAAAAGGCCATCAATTAGGACCCTATTTGATGACGAATCAGCTATGGCTGCGAATCAACCTGGCCAAGGGAGCTTCTTAAAACTCTTACCTACTCAACCAGAGGTTCCTGAGAAGAGTGAATACCAATGA 1644 0.4161 MDNTRCWFNRFKSKDKVPSTKHKDTMSTGKEGSRPPTNEEAPSSATKQKVAAAKQFIENHYKKQMKDLQERKERRNMLEKKLADAEVSEEEQNNLLKYFEKKEREYMRLQRHKMGADDFEPLTMIGKGAFGEVRICREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYYSFQDEEYLYLIMEYLPGGDMMTLLMRKDILTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQETDFSMGNNRSGALRSDGRPVAPKRTQQEQLQHWQKNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMLTCRKIVNWRTHLKFPEEAKLSPEAIDLISRLLCNVEQRLGTKGAYEIKAHPWFKGIEWDKLYQMKAAFIPEVNGELDTQNFEKFEECDNQTQPSSKSGPWRKMLSSKDINFVGYTYKNYEIVNDDQLPGIAELKKKNTKTKRPSIRTLFDDESAMAANQPGQGSFLKLLPTQPEVPEKSEYQ* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1171 547 MobiDBLite consensus disorder prediction 280 303 - -
Amo17g1171 547 SUPERFAMILY Protein kinase-like (PK-like) 94 470 IPR011009 -
Amo17g1171 547 ProSiteProfiles Protein kinase domain profile. 119 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g1171 547 MobiDBLite consensus disorder prediction 516 547 - -
Amo17g1171 547 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
Amo17g1171 547 MobiDBLite consensus disorder prediction 1 50 - -
Amo17g1171 547 MobiDBLite consensus disorder prediction 7 29 - -
Amo17g1171 547 Pfam Protein kinase domain 121 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g1171 547 Gene3D Transferase(Phosphotransferase) domain 1 203 270 - -
Amo17g1171 547 Gene3D Transferase(Phosphotransferase) domain 1 313 436 - -
Amo17g1171 547 PANTHER SERINE/THREONINE-PROTEIN KINASE 41 521 - -
Amo17g1171 547 Gene3D Phosphorylase Kinase; domain 1 117 202 - -
Amo17g1171 547 Gene3D Phosphorylase Kinase; domain 1 437 447 - -
Amo17g1171 547 Pfam Protein kinase C terminal domain 437 481 IPR017892 GO:0004674|GO:0005524|GO:0006468
Amo17g1171 547 SMART serkin_6 119 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g1171 547 CDD STKc_NDR_like 117 482 - -
Amo17g1171 547 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 41 521 - -
Amo17g1171 547 MobiDBLite consensus disorder prediction 30 50 - -
Amo17g1171 547 SMART pkinase_C_6 419 483 IPR000961 GO:0004674|GO:0005524|GO:0006468
Amo17g1171 547 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Amo17g1171 547 Coils Coil 61 95 - -
Amo17g1171 547 ProSiteProfiles AGC-kinase C-terminal domain profile. 419 491 IPR000961 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1171 Amo-Chr17 32457807 32464339 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1171 1 545 AGC Kinase Gene Family AT3G23310 80.874 0.0 895
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Amo17g1171 Pkinase 4.3e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1171 K08790 - gmx:100805439 1022.69