Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1166 ATGGACAACAACACTACCGCCAACGGCACCAACAATTTCAACGTCGCCGAGTCTCGTGACTCATCGCCGCGCTCTCGGGACGCTGACAACAACGGCAACCACTACAACAACAGCAATAACTCCTTCATCGATGAACCGCCTCCGCCATCCTCCGCCGCTACAACCGCCAAGGTGAAATTCATGTGCAGCTACGGCGGAAGGATCCAGCCCCGCCCTCACGATAACCAGCTCACCTACATCGGCGGCGACACCAAGATCGTCGCTGTCGATCGCCACGTCAAATTCTCTGCCCTCGTCTCCAAGCTCTGCTCCATCGCTAACGCCGATGTCTGCTTCAAGTACCAGCTTCCCGGCGAGGACCTCGACGCCCTCATTTCCGTCACCAATGACGAAGACCTCGACCACATGATGGTCGAGTACGATCGCCTGTGCCGCTCCTCACCTAGACCCGCACGCCTGAGGCTCATCCTCTTTCCTCTCCCCAACACCACCACCAGCACCACCAGCACCACCACAACCACAATCGCAACCACCACCAACAATGCGCCTCTTCCTCCTCACCCTTCAGTTCTTACCAAACCCGAGCGTCAGTGGTTCGTGGACGCTCTCAACTCCGTTCGGATTCCAGAACCTTCTTCTTCCTCGTCTCCTACGCAACTGCCTCATCCATCTTTCGCGGCATTGAATCCGGATTTTCTGTTCGGATTAGATAATCATAAACCACATCACGCGGTTTCAATGGATCCCGCACCTTCCGCTCCAACCGTTCCGGATTTCTCTATTGGATCCTCGGAAAACGCGCCAGAAGCGGTTGGAGAAACTGAATTCGTTAGGCACGTGCAGGAGATGCAGAGGCTTCACCTCCGGAACAACAACACGACCAGTGACCAACCACCACAGCCTCAACGGAAAAGCACCGAAGAGAACGGCGTTGAGTATTACGCTCAGAAGAATCAAGAGAAACCGACTAATTCAGGACCGGTTCACGGAAATGGACCGGTTCCCGTTCCGGTTCATGGCTCTTTTTTGCACAACCCGGTTGGTCATGGTGGCGGTTACTCTTTGCCGGTTTCTGGAACCGGAGTTGAACCGGCTCCGGTTTATATCATTCAGACGCCTTCGGGAGTCTACCAGGCAATAACACCGGTGGCCGGACCGGTTGGTCCCGGTCCGGTTTATCTGATTCAGAAGACGCCGGCGTCGGTTTCACATGCACCGACGCCGGTGTCGCATGCACCGGCGCAGAATGGTGGTTACGGCGGTTCCGAGGTTGGTTCGGCTGCGGAGCGAGGCTACTCGCAGGTTGCATATGCGGTACGACCGCAGGCGGCAGCGGCTCCCAGCGGTGACGGGTGGAACTGA 1362 0.5668 MDNNTTANGTNNFNVAESRDSSPRSRDADNNGNHYNNSNNSFIDEPPPPSSAATTAKVKFMCSYGGRIQPRPHDNQLTYIGGDTKIVAVDRHVKFSALVSKLCSIANADVCFKYQLPGEDLDALISVTNDEDLDHMMVEYDRLCRSSPRPARLRLILFPLPNTTTSTTSTTTTTIATTTNNAPLPPHPSVLTKPERQWFVDALNSVRIPEPSSSSSPTQLPHPSFAALNPDFLFGLDNHKPHHAVSMDPAPSAPTVPDFSIGSSENAPEAVGETEFVRHVQEMQRLHLRNNNTTSDQPPQPQRKSTEENGVEYYAQKNQEKPTNSGPVHGNGPVPVPVHGSFLHNPVGHGGGYSLPVSGTGVEPAPVYIIQTPSGVYQAITPVAGPVGPGPVYLIQKTPASVSHAPTPVSHAPAQNGGYGGSEVGSAAERGYSQVAYAVRPQAAAAPSGDGWN* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1166 453 MobiDBLite consensus disorder prediction 1 52 - -
Amo17g1166 453 MobiDBLite consensus disorder prediction 167 190 - -
Amo17g1166 453 MobiDBLite consensus disorder prediction 243 272 - -
Amo17g1166 453 Gene3D - 78 159 - -
Amo17g1166 453 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 16 409 - -
Amo17g1166 453 SUPERFAMILY CAD & PB1 domains 73 166 - -
Amo17g1166 453 MobiDBLite consensus disorder prediction 1 19 - -
Amo17g1166 453 MobiDBLite consensus disorder prediction 404 425 - -
Amo17g1166 453 MobiDBLite consensus disorder prediction 167 186 - -
Amo17g1166 453 SMART PB1_new 72 160 IPR000270 GO:0005515
Amo17g1166 453 MobiDBLite consensus disorder prediction 289 308 - -
Amo17g1166 453 Pfam PB1 domain 73 159 IPR000270 GO:0005515
Amo17g1166 453 MobiDBLite consensus disorder prediction 28 48 - -
Amo17g1166 453 CDD PB1_UP2 61 158 - -
Amo17g1166 453 PANTHER OS05G0427100 PROTEIN-RELATED 16 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1166 Amo-Chr17 32286379 32288649 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1166 57 158 MAP Kinase Kinase Kinase AT3G46920 50.485 4.92e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1166 - - adu:107459343 833.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g1166 17 32286379 32288649 Amo17g1166 17 32286379 32288649 ECH