Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1151 TACTTTTCAAGTACGCAAGCAACTAGCAATTTTCTCTTGTTTTTTGTTCACTCTCTACTGCTTGACTCAATACCTGTTTGGATTGCTGCATGCTTTTTTGCTGAGCTTGGATATGCAAAACCTGTTGCTAAAGAAGTTCTGAAGGGTCTTTTTGTGCCAGAACTAAAAGGAAGCGGTGCTACTGGTCTCGCGATTTCACTCCTAGGGGCTATGATTATCCAGTATACCACTCACTGTATGATGATTTCATCTGGATGCAGAACTTTGGAGATCCTATGTTTCATAGGCATGTTGCAGGTTGGTGGCATTCAATTTCCTTTTTCAGTTTATGTCACATTAAACTCCATCTCAGTTAACTCTAATGATATCAAAATGTTTCTTGAAGAGTTAAGAATTTAA 399 0.3835 YFSSTQATSNFLLFFVHSLLLDSIPVWIAACFFAELGYAKPVAKEVLKGLFVPELKGSGATGLAISLLGAMIIQYTTHCMMISSGCRTLEILCFIGMLQVGGIQFPFSVYVTLNSISVNSNDIKMFLEELRI* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1151 132 Pfam Natural resistance-associated macrophage protein 27 75 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo17g1151 132 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 19 74 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo17g1151 132 PANTHER METAL TRANSPORTER NRAMP6 19 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1151 Amo-Chr17 31790190 31791075 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1151 28 76 Inorganic Solute Cotransporters AT1G15960 71.429 5.15e-17 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1151 K21398 - aip:107621907 137.117