Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1133 ATGGTCAAAATGATCTCCAATAATAACAAGAACAATGACGATGGTGAGTCTTGGAGAGATGATTTGAGAGAGAGGCCTTGGACGCAGAGAGAGGACGCCATACTTATTATCGAGCAGGTAAAGAAGTGTGGCGAAGGTAATTGGAGTTTAATTCGAAAGAATTCTGAATGGTCGAACCATCTAAGGCCTGACTTGAAGAAGGGTCCTTTCTCTGAAGAAGAGGAGAAACTCATCGATGATCTTCATGCTAAGATTGGAAACAGATGGACTCTAATGGCTACCAAGCTAAGATTCAGCAATAATCAACAATAG 312 0.4135 MVKMISNNNKNNDDGESWRDDLRERPWTQREDAILIIEQVKKCGEGNWSLIRKNSEWSNHLRPDLKKGPFSEEEEKLIDDLHAKIGNRWTLMATKLRFSNNQQ* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1133 103 MobiDBLite consensus disorder prediction 1 24 - -
Amo17g1133 103 Gene3D - 66 103 - -
Amo17g1133 103 ProSiteProfiles Myb-like domain profile. 62 103 IPR001005 -
Amo17g1133 103 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 8 96 - -
Amo17g1133 103 SUPERFAMILY Homeodomain-like 25 91 IPR009057 -
Amo17g1133 103 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 8 96 - -
Amo17g1133 103 Pfam Myb-like DNA-binding domain 27 77 - -
Amo17g1133 103 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 103 IPR017930 -
Amo17g1133 103 Gene3D - 19 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1133 Amo-Chr17 30884358 30885353 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1133 22 96 MYB Transcription Factor Family AT2G32460 53.488 8.65e-24 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Amo17g1133 Myb_DNA-bind_6 9.4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1133 K09422 - ahf:112771967 162.925