Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1103 ATGCATGAAACTCAACAACAAATGGGTGCATGCGCAAGTTCTTTCTCAAGTATGATGCAAGAATGGATGATGAAGTCTTCTTCTTCTACAAGCTATGCACACACAATGGATCAGGTTTTGTTGCAAATGCAGCATCATCAACGTCAACCACAAGGATTCCCTTTGATAGGTGGCGCTGGTGGCGGCGGAGATCTTCAGCAGTTAAGAAATGTTGAAGGATCATCATCTATGGAGAAATCAATGAAAGGGCTTGAGGTACAAGTTCATGCTACTCAACTATCACCTTCAAGGCCACGGAAAAGGAAGAATGATGCGGAGAAGAGAGTAGTGAATCTTCCAGCTCAACAACTTGGAAACACAGAAATGCCTATGGAAGATGGATTCACTTGGAGAAAATATGGTCAGAAAGAGATACTTGGTTCTAAGTATCAAAGGAGTTATTACAGGTGCACCCACCAGAAACAATATGGATGCCCAGCAAAGAAACAAGTGCAGAAAATTGATAACAATCCAAACATATTTGAAGTAACATACGTTGGGGATCACACATGCCACATGTCATCAACAGCACCATCATCATTTCCACAGCAACTTCAACTTGATAACATTAACATAATGCCTCCCAATAATCCTCTTCAAGGAGCAGGAGGACCTAACACTTCCTCTCCTTCTTCTTCTATGTGGATGCACTCAGTTAGTCTCAGTCTCGGCGGCGGCGGCGGCGATGGCAGCAGCAGCGGTGGTGCTGGACCGTCTACTTTGAAATACGGTGTCGGCGGTGCTGATTATCTGGTGGCGGATATGGCTGATGTTATGTTTAATTCTGGGAGTAGCAGTGGGAATTGCAGTATGGAATCTCTCTTCCCTACTTCTGATGATAAATGGGATCCAAGTGAAAAGAAAACCTGA 909 0.44 MHETQQQMGACASSFSSMMQEWMMKSSSSTSYAHTMDQVLLQMQHHQRQPQGFPLIGGAGGGGDLQQLRNVEGSSSMEKSMKGLEVQVHATQLSPSRPRKRKNDAEKRVVNLPAQQLGNTEMPMEDGFTWRKYGQKEILGSKYQRSYYRCTHQKQYGCPAKKQVQKIDNNPNIFEVTYVGDHTCHMSSTAPSSFPQQLQLDNINIMPPNNPLQGAGGPNTSSPSSSMWMHSVSLSLGGGGGDGSSSGGAGPSTLKYGVGGADYLVADMADVMFNSGSSSGNCSMESLFPTSDDKWDPSEKKT* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1103 302 MobiDBLite consensus disorder prediction 207 233 - -
Amo17g1103 302 SMART WRKY_cls 124 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo17g1103 302 Gene3D WRKY domain 103 179 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo17g1103 302 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 49 221 IPR044810 GO:0003700
Amo17g1103 302 MobiDBLite consensus disorder prediction 277 302 - -
Amo17g1103 302 Pfam WRKY DNA -binding domain 125 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo17g1103 302 PANTHER WRKY TRANSCRIPTION FACTOR 55 49 221 - -
Amo17g1103 302 ProSiteProfiles WRKY domain profile. 119 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo17g1103 302 MobiDBLite consensus disorder prediction 207 232 - -
Amo17g1103 302 SUPERFAMILY WRKY DNA-binding domain 121 186 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1103 Amo-Chr17 29509985 29514835 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1103 18 292 WRKY Transcription Factor Family AT2G40740 35.636 1.35e-40 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Amo17g1103 WRKY 5.5e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1103 - - aip:107607129 578.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g1103 17 29509985 29514835 Amo17g1103 17 29509985 29514835 ECH