Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1073 ATGTTTGATCGTGTGAATATTTTGTGGCCTTCTTTTCAGGAAATATATCTTCTGAGTCAATTTGGAGATGAGAACATAGTTAGATATGTTGGCACAAACAAGGAAAATAACATGCTATGCATCTTTCTCGAGCTTGTAACAAAAGGATCATTGGCAAGTCTTTATAGAAAGTATTGCTTAAAGGATTCTCAGGTTTTGGCATACACAAGACTAATTCTAAGTGGTTTGAAGTATTTTCATGATCGTAAGGTGGTTCACAGGGACATCAAGTGTGCTAATATATTGGTTGATGCAAATGGATCCGCGAAGCTTGCATACATGTAA 324 0.3611 MFDRVNILWPSFQEIYLLSQFGDENIVRYVGTNKENNMLCIFLELVTKGSLASLYRKYCLKDSQVLAYTRLILSGLKYFHDRKVVHRDIKCANILVDANGSAKLAYM* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1073 107 SUPERFAMILY Protein kinase-like (PK-like) 12 105 IPR011009 -
Amo17g1073 107 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 13 105 - -
Amo17g1073 107 Pfam Protein kinase domain 12 104 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g1073 107 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 13 105 - -
Amo17g1073 107 Gene3D Transferase(Phosphotransferase) domain 1 4 106 - -
Amo17g1073 107 ProSitePatterns Serine/Threonine protein kinases active-site signature. 84 96 IPR008271 GO:0004672|GO:0006468
Amo17g1073 107 ProSiteProfiles Protein kinase domain profile. 1 107 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1073 Amo-Chr17 28476411 28476953 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1073 14 105 MAP Kinase Kinase Kinase AT4G08500 66.304 5.13e-35 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Amo17g1073 Pkinase 3.9e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1073 - K13414 var:108347588 145.976