Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1057 ATGATAGATGCTGGGAAGGCAAATATGGCGGATCTTTTTCCACTTCTTCAATTTCTTGATCCACAAGGCATCCGAAAGAGGGGAGATGACGATACTCAGAAGTTGTTGAAAGTTTTTGGTGATATTTTCGATAAAAGAATGCTACTAAAAACTTCATCAAATAAGAATTTTGAAGTATACGATGATGTATTGGATTCTTTTATTAATATCGTCAAGGAAAATAGTTTGACAGAATTAAGTTGTCATTATTTACTACATTTATTTGTGGATTTATTTGTTGCTGAGATAGAAACAACAACAAGCACAATAGAATGGGCAATGACAGAATTGGTGCACAACCCTAAAAAGATGGCTAGAGTCAAAGAGGAGCTCCTACAAGTCCTTGGCAAAGATGGCAAGCCACATGAATCAAATATCTCTGAATTTCATTACATAAATGCAATTGTGAAGGAAACATTTCGGTTGCAGCCACCAGTTCCCTTTTTAGTTTTACAACACAAATCAAAGTCTATGGTAGAAATATGTGGCTTCAAAGTTCCCAAGGACACACAAGTTCTAATTAACTTATGGGCCATTGGACGAAATTCTAGCACTTGGAGTGACCCAAATTCCTTTGTGTCAGAAAGGTTCTTAGAGTCCAAAATGGATGTTAAGAGTTTTGATATTGGGCTCATTCCATTTGGGGCTGGAAGAAGAATGTGTCCAGCACTTCCACTTGCTCATAGAACAGTGCATTTCATCTTGGCCTCTCTTCTACACTATTTTGATTGGAAGATTGTTGATGTTGTTAAGCATGCATCAAGGATCCTAAATGGAGATTCTCTCAACAGGAGAGCACCTTTCCTCTCTACAGGAGAGTACCACTACAGGGTTACTCCAATTAGGGAGTTGCTTCAATTTCAATTTCAACCAAAACATAAACAGTTACATTAA 933 0.373 MIDAGKANMADLFPLLQFLDPQGIRKRGDDDTQKLLKVFGDIFDKRMLLKTSSNKNFEVYDDVLDSFINIVKENSLTELSCHYLLHLFVDLFVAEIETTTSTIEWAMTELVHNPKKMARVKEELLQVLGKDGKPHESNISEFHYINAIVKETFRLQPPVPFLVLQHKSKSMVEICGFKVPKDTQVLINLWAIGRNSSTWSDPNSFVSERFLESKMDVKSFDIGLIPFGAGRRMCPALPLAHRTVHFILASLLHYFDWKIVDVVKHASRILNGDSLNRRAPFLSTGEYHYRVTPIRELLQFQFQPKHKQLH* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1057 310 Gene3D Cytochrome P450 1 276 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g1057 310 Pfam Cytochrome P450 7 261 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g1057 310 PRINTS P450 superfamily signature 147 158 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g1057 310 PRINTS P450 superfamily signature 94 111 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g1057 310 PRINTS P450 superfamily signature 225 234 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g1057 310 PRINTS E-class P450 group I signature 103 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g1057 310 PRINTS E-class P450 group I signature 224 234 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g1057 310 PRINTS E-class P450 group I signature 234 257 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g1057 310 PRINTS E-class P450 group I signature 188 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g1057 310 PRINTS E-class P450 group I signature 146 164 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g1057 310 PRINTS E-class P450 group I signature 83 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g1057 310 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 264 - -
Amo17g1057 310 SUPERFAMILY Cytochrome P450 10 261 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g1057 310 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 227 236 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1057 Amo-Chr17 27958086 27959570 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1057 5 263 Cytochrome P450 AT1G33720 47.308 1.65e-81 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1057 - - aip:110265025 521.546