Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1025 AAAACAAGACAACTGATCATCACGTTGTCAAATATTTCTCTTTTATTCTTAAACAACCATTTTCAGGAGGACATGCTTATAGTACAAGATGAAATATTTGGCCCTGTGATGTCACTAATGAAATTCAAGACTATTGAAGAGGCAATTATGAGGGCTAATAACACCAAGTATGGGCTAGCAGCAGGAATTGTGACAAAGAATTTGGATATTGCAAACACAGTGTCCAGGTCCATTCGTGCAGGCATTGTTTGGATCAACTGCTATTTCATATTTAGGAGTGACATTCCTTATGGAGGGTATAAGCATAGTGGATTTGGAAGAGAATATGAAATGCAAGCACTCCACCAGTACCTGCAACAGAAATCTGTTGTAACTCCAATTTACAACTCTCTTTGGCTTTGA 402 0.3781 KTRQLIITLSNISLLFLNNHFQEDMLIVQDEIFGPVMSLMKFKTIEEAIMRANNTKYGLAAGIVTKNLDIANTVSRSIRAGIVWINCYFIFRSDIPYGGYKHSGFGREYEMQALHQYLQQKSVVTPIYNSLWL* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1025 133 PANTHER DEHYDROGENASE, PUTATIVE-RELATED 20 133 - -
Amo17g1025 133 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 95 123 IPR016162 GO:0016491
Amo17g1025 133 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 20 133 - -
Amo17g1025 133 Pfam Aldehyde dehydrogenase family 21 123 IPR015590 GO:0016491
Amo17g1025 133 SUPERFAMILY ALDH-like 21 132 IPR016161 GO:0016491
Amo17g1025 133 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 20 94 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1025 Amo-Chr17 26749856 26750335 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1025 23 133 Aldehyde Dehydrogenase Gene Family AT3G24503 69.369 3.50e-51 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1025 K12355 - ahf:112766661 223.402