Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1023 ATGAGAGTAATGAGCTTTTCTGGAGGCACAACAGCACCGGCTTCTTTGTTTGCTCCTACAGAAATGCCTATTCTAGCTTTAGGTTATTCTAAGTTGAGTGCTACTGCATTGGCACTTCGGTTGCCATGTAACTGCATGAGGAGGATGCGTTTGGTTACAAAGCTTAAGTATTCTGTTGCCGATAGGACATCATCTGCCTCCAGTCATGTGGATTCACCAGCAGAGTCGCGTCCGGTGAGTAGGAGGCGGGGAGGTGGCTCGTCGTTATATATTCGTCCTAGTTTGTCAGTAATGAAGAAGGATAGGGAGGAGATGCGTGAAAAGGTTTATGAGTTTTTGCGGGGAATTGGCATTGTTCCTGATGAGCTAGATGGTCTTGAACTTCCTGTGACAGTTGATGTTATGAGGGAACGCATAGATTTTCTTCACAGTTTAGGACTTACAATTGAAGATATTAACAATTATCCACTTGTTCTTGGCTGCAGTGTCAAGAAGAATATGATTCCGGTGCTCGATTACCTTGGTAAATTGGGAGTCAGGAAATCCACATTCACTCAGTTTTTGAGGAGATACCCACAAGTGCTTCATGCGAGTGTGGTTGTGGATCTTGTGCCGGTGATCAAGTATCTTGAGGGGATGGATATAAAGCCAAATGATATTCCTCGTGTTCTCGAGAGGTACCCTGAAGTGCTAGGATTCAAACTTGAGGGAACCATGAGCACATCAGTTGCTTATTTGGTTGGGATTGGTGTATCCAGAAGAGAAGTTGGAGGGGTCTTAACTAGATATCCAGAGATTTTGGGGATGCGAGTTGGTAGAATCATCAAACCTTTTGTGGAATTTCTGGAAAGCTCGGGGATTCCAAGGTTAGCTGTTGCTAGGTTGATAGAGAAAAAACCTTATATTCTTGGATTTGGGTTAGACGAGAAGGTGAAGCCCAATGTGAAGTCCCTTGAAGAGTTTAATGTCAGGCGAACATTACTTCCCTCTATAATTGCTCAATATCCTGACATAATCGGAATCGACCTAGAACCAAAGCTTGCGAATCAGAGGAGTTTACTCAACACTGTACTTGACGTGGATCCTAATGATTTCGGAAGAATTGTTGAGAAGATGCCGCAGGTAGTTAGCCTCACCAAAGGACCTATGCTGAAACATGTTGATTTTCTTAAGGATTGTGGATTTTCTTTAGAGCAAATGAGGAAGATGATTGTTGGATGCCCTCAACTGCTCGCTTTAAACATCGACATTATGAAACTTAGCTTTGATTACTTCCAAATAGATATGAAAAGGTCATTGGAAGACTTGGTTATTTTCCCAGCATTCTTCACGTATGGTCTGGAGTCAACTGTAAAACCAAGGCATAAGGTGATTGCTAAGAAAGGATTAAAGTGTTCTCTTTCATGGATGCTTAATTGTTCTGATGAGAAGTTTGAGCAACGAATGGAATATGACACTATTGATATGGAGGAGATGGAAACTGAACCATCATTTGATATGAATTCACTGATGCAACCAAGGAATGATGAATCGGGTTCTGACTATGAAGATTATGATGATAGTGATGATGATTAA 1575 0.4178 MRVMSFSGGTTAPASLFAPTEMPILALGYSKLSATALALRLPCNCMRRMRLVTKLKYSVADRTSSASSHVDSPAESRPVSRRRGGGSSLYIRPSLSVMKKDREEMREKVYEFLRGIGIVPDELDGLELPVTVDVMRERIDFLHSLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSTFTQFLRRYPQVLHASVVVDLVPVIKYLEGMDIKPNDIPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVSRREVGGVLTRYPEILGMRVGRIIKPFVEFLESSGIPRLAVARLIEKKPYILGFGLDEKVKPNVKSLEEFNVRRTLLPSIIAQYPDIIGIDLEPKLANQRSLLNTVLDVDPNDFGRIVEKMPQVVSLTKGPMLKHVDFLKDCGFSLEQMRKMIVGCPQLLALNIDIMKLSFDYFQIDMKRSLEDLVIFPAFFTYGLESTVKPRHKVIAKKGLKCSLSWMLNCSDEKFEQRMEYDTIDMEEMETEPSFDMNSLMQPRNDESGSDYEDYDDSDDD* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1023 524 Pfam mTERF 171 479 IPR003690 GO:0003690|GO:0006355
Amo17g1023 524 MobiDBLite consensus disorder prediction 66 87 - -
Amo17g1023 524 PANTHER CGI-12 PROTEIN-RELATED 38 512 IPR003690 GO:0003690|GO:0006355
Amo17g1023 524 SMART mt_12 257 288 IPR003690 GO:0003690|GO:0006355
Amo17g1023 524 SMART mt_12 185 216 IPR003690 GO:0003690|GO:0006355
Amo17g1023 524 SMART mt_12 401 432 IPR003690 GO:0003690|GO:0006355
Amo17g1023 524 SMART mt_12 433 464 IPR003690 GO:0003690|GO:0006355
Amo17g1023 524 SMART mt_12 329 361 IPR003690 GO:0003690|GO:0006355
Amo17g1023 524 SMART mt_12 366 396 IPR003690 GO:0003690|GO:0006355
Amo17g1023 524 SMART mt_12 293 324 IPR003690 GO:0003690|GO:0006355
Amo17g1023 524 SMART mt_12 221 252 IPR003690 GO:0003690|GO:0006355
Amo17g1023 524 SMART mt_12 149 180 IPR003690 GO:0003690|GO:0006355
Amo17g1023 524 MobiDBLite consensus disorder prediction 494 524 - -
Amo17g1023 524 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF4, CHLOROPLASTIC 38 512 - -
Amo17g1023 524 Gene3D Transcription termination factor 3, mitochondrial 91 201 IPR038538 -
Amo17g1023 524 Gene3D Transcription termination factor 3, mitochondrial 273 488 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1023 Amo-Chr17 26668951 26674145 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Amo17g1023 mTERF 1.5e-104 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1023 K15032 - gmx:100785223 793.882