Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1022 ATGAAGAGTGTGAAGGAAAAGATGAAGTCATCACAAGCAATAGTGAGTATGTTAATGGTGCAAATATTCGCAACTGGGATGCAGCTTCTATCAAGAGTGATATTGGTTAATGGCACCTTCATTTTCGCACTCACTTCTTATCGCCATGTTGTTGCTGCTCTTTTTGTTGCCCCTTTTGCTCTTTACTTTGAAAGAGACAGGGAAAAGAAATTCACTTTGAAAGTATGGTTTTGGATCTTCATTAACGCTTTAACTGGAATGACAATGGCTCAGGGATTGTATTATTATGGGTTGAGGGACACTTCAGCTACTTACTCCATCAATTTTCTCAACCTGGTTCCAATATGCACATTTGCTGTGTCTATTATATGCAGAATTGAGAAACTGAGGGTGAAAACATGGGGTGGTAGAGCAAAGTGTGTGGGAGCAATGTTGTGTGTTGGAGGTGCATTGGTTACAAGCCTTTACAAAGGCCATGAATTCTTCATTGGTCAACGCCACCATGGCCACCATGATTCTCATTCTTCTGCTGCTTTGACTCACAAGACCAACATGCTTCGTGGAACTATCTTCTTGGTTCTTAGCTGTTTCTCATACACAGCTTGGTTCATTGTGCAAGTAAAGTTGCTGAAAGAATTTCCATTTAAATATTGGGGAACAATGCTAGCTTGTATTATGGCATCAATTCAATCTGTAGTAATTGGCTTATGCATAGATTCCAGCGGTGCTTCTTGGAAGATACACTGGAATCTACAGCTTGTTACTATACTCTATTCGGGAGTACTTGCTACGGGTGCAACATTTTGTTTACTTTCATGGGCTATTTCAGTAAAAGGACCAACATACCCTCCAATGTTTAATCCCCTTGCTCTTATTTTTGTGGCCATATCAGAAGCTCTCGTACTTGGTGAACCATTAAAAGTTGGAACGTTGTTGGGGATGGTTTTGATAATATCAGGATTGTACTCATTCTTGTGGGGAAAAAAGAAGGAACCAAAAAGCTTGGCTCAGTCAAATGTGGTAGCAGCAGAAGTGTCAGCTGACTCTGCATTGCCACAAGCAACTGCTGTTGTAGTACCAAGAGCTTCTTCACCTACTAGCAATGTAGTTTTAGAGGTAGAAACTACTAACAAGTAG 1137 0.4055 MKSVKEKMKSSQAIVSMLMVQIFATGMQLLSRVILVNGTFIFALTSYRHVVAALFVAPFALYFERDREKKFTLKVWFWIFINALTGMTMAQGLYYYGLRDTSATYSINFLNLVPICTFAVSIICRIEKLRVKTWGGRAKCVGAMLCVGGALVTSLYKGHEFFIGQRHHGHHDSHSSAALTHKTNMLRGTIFLVLSCFSYTAWFIVQVKLLKEFPFKYWGTMLACIMASIQSVVIGLCIDSSGASWKIHWNLQLVTILYSGVLATGATFCLLSWAISVKGPTYPPMFNPLALIFVAISEALVLGEPLKVGTLLGMVLIISGLYSFLWGKKKEPKSLAQSNVVAAEVSADSALPQATAVVVPRASSPTSNVVLEVETTNK* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1022 378 Pfam EamA-like transporter family 14 151 IPR000620 GO:0016020|GO:0016021
Amo17g1022 378 Pfam EamA-like transporter family 187 324 IPR000620 GO:0016020|GO:0016021
Amo17g1022 378 PANTHER WAT1-RELATED PROTEIN 11 342 - -
Amo17g1022 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 331 - -
Amo17g1022 378 PANTHER WAT1-RELATED PROTEIN 11 342 IPR030184 GO:0016021|GO:0022857
Amo17g1022 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1022 Amo-Chr17 26637763 26644328 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1022 15 329 Nodulin-like Gene Family AT1G09380 35.890 9.03e-66 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1022 - - gmx:100782551 494.582