Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo17g0977 | ATGAAGTGGGAAATGGAAATATTGTCTCCAACTACAACACCTTATAATCCAAATTCCAACCTCAGCAACACCAACAACACCTTCAATTGGCTTCTTGGAGATGGAAGGAGCACAAGATGGACACCCGAAGAGAACAAGCTCTTCGAAAATGCGCTGGCCGTTCACGACAAGGACACGCCGGACCGGTGGCACCAGGTGGCTGCAATGATACCTGGGAAGACAGTTGGAGATGTTATCAAGCAATACAAGGAATTAGAAGTTGATGTGTGTAACATTGAGGCTGGTTTGATCCCGGTTCCGGGGTATAGTACTACTTCACCATTTACCTTAGAATGGGTGAATTCTCAAGGGTATGATGATGGATTTAAAGGACTAAGTGGAAAGAGACCTTCTTCTTGCTCAGTGAAGCCACCTGAGCAAGAAAGGAAGAAAGGAGTGCCATGGACTGAAGAAGAACATAAATTGTTCTTGCTTGGTTTGAAGAAGTATGGGAAAGGTGACTGGAGAAACATTTCGCGAAATTTCGTGATAACAAGAACACCAACACAGGTTGCAAGCCATGCTCAGAAGTACTTCATAAGGCAACTTTCCGGAGGCAAAGACAAAAGGAGAGCAAGCATCCATGACATAACAACAGTTAATGTCACTGAAACCGGAACATCTTCTTCAGAAGACACCAAAAGTTCGATGATGCTCTCACAGCAGCAGCAGCAACAAAATTCTAGTTCTGCTGCAACTATACCAAGAACTCATCATTTTCAGTGGAATAATCAACAACCAAATAATGCAGCAGGAGGAGTAGCTATGGAAAAAGTTTTCAATTCTCCTTATGGTGTTAACTCATTTGGGGTTACAATAATGGAAGGGCAAAATCTGAACAAGAGTGTTGAATCTTCTTCATCTTCTTCTTACTTAGGACCTCAGACACAGAACCTGGTTTTTCAAATGCAACAACAATCCTCACAACAACAACAACACTATTCCCATGCATAA | 993 | 0.424 | MKWEMEILSPTTTPYNPNSNLSNTNNTFNWLLGDGRSTRWTPEENKLFENALAVHDKDTPDRWHQVAAMIPGKTVGDVIKQYKELEVDVCNIEAGLIPVPGYSTTSPFTLEWVNSQGYDDGFKGLSGKRPSSCSVKPPEQERKKGVPWTEEEHKLFLLGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTVNVTETGTSSSEDTKSSMMLSQQQQQQNSSSAATIPRTHHFQWNNQQPNNAAGGVAMEKVFNSPYGVNSFGVTIMEGQNLNKSVESSSSSSYLGPQTQNLVFQMQQQSSQQQQHYSHA* | 331 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo17g0977 | 330 | MobiDBLite | consensus disorder prediction | 127 | 147 | - | - | |
Amo17g0977 | 330 | ProSiteProfiles | SANT domain profile. | 148 | 196 | IPR017884 | - | |
Amo17g0977 | 330 | SMART | sant | 144 | 194 | IPR001005 | - | |
Amo17g0977 | 330 | SMART | sant | 36 | 88 | IPR001005 | - | |
Amo17g0977 | 330 | SUPERFAMILY | Homeodomain-like | 38 | 92 | IPR009057 | - | |
Amo17g0977 | 330 | ProSiteProfiles | Myb-like domain profile. | 140 | 192 | IPR001005 | - | |
Amo17g0977 | 330 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 143 | 195 | IPR006447 | GO:0003677 | |
Amo17g0977 | 330 | ProSiteProfiles | SANT domain profile. | 35 | 90 | IPR017884 | - | |
Amo17g0977 | 330 | PANTHER | DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED | 1 | 298 | IPR043363 | - | |
Amo17g0977 | 330 | MobiDBLite | consensus disorder prediction | 216 | 245 | - | - | |
Amo17g0977 | 330 | PANTHER | MYB TRANSCRIPTION FACTOR MYB51 | 1 | 298 | - | - | |
Amo17g0977 | 330 | MobiDBLite | consensus disorder prediction | 296 | 330 | - | - | |
Amo17g0977 | 330 | CDD | SANT | 39 | 85 | IPR001005 | - | |
Amo17g0977 | 330 | CDD | SANT | 147 | 192 | IPR001005 | - | |
Amo17g0977 | 330 | Gene3D | - | 34 | 99 | - | - | |
Amo17g0977 | 330 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 140 | 196 | IPR017930 | - | |
Amo17g0977 | 330 | Gene3D | - | 146 | 196 | - | - | |
Amo17g0977 | 330 | SUPERFAMILY | Homeodomain-like | 141 | 195 | IPR009057 | - | |
Amo17g0977 | 330 | Pfam | Myb-like DNA-binding domain | 147 | 192 | IPR001005 | - | |
Amo17g0977 | 330 | Pfam | Myb-like DNA-binding domain | 39 | 83 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo17g0977 | Amo-Chr17 | 25160470 | 25162476 | Dispersed/Transposed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Amo17g0977 | Myb_DNA-binding | 1.7e-12 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo17g0977 | - | - | gmx:778034 | 399.053 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Amo17g0977 | 17 | 25160470 | 25162476 | Amo17g0977 | 17 | 25160470 | 25162476 | ECH | |
Amo17g0977 | 17 | 25160470 | 25162476 | Amo11g0214 | 11 | 3232991 | 3235377 | ECH | |
Amo12g2224 | 12 | 101548679 | 101550525 | Amo17g0977 | 17 | 25160470 | 25162476 | ECH |