Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0975 ATGATTCCTAGTGAGATTGATATGAGAGGTATCCAGTATCTAGCACCAGAAAACCAATTTCTTGTTCCACCTTATAATAATGATAATAATAATAATAATAATAACCTCAGTTGCTTGATTCATAGTGAAATCCCAACCTTCCGTGATAATCTAAACACGCTCTTAACCAACATACCCATCTACAGTTACAATAACAATAACTTCCCTTGTGCATTAGGAAATGACTTTATTGTCCCTCATAATTCGTCATGCCTCAGCAGCAACTCAACGACCTCCGACGAAGCCGACGAGCTTCCGCTCAGCGTGATTGACGAGCGAAAGCAGAGGCGGATGATATCGAACCGCGAGTCGGCTCGGAGGTCGAGGATGAGGAAGCAGAAACACCTTGACGAACTCTGGTCTCAGGTTGTTAGGCTCAGAAGCGAGAATCACAACCTTATTGACAAGCTCAACAACATGTCTGAGTCACATGATAGAGTTCTTCAGGAGAATGCAAGACTCAAGGAAGAAGCTTCCGATCTCCGCCAAATGATAGCGGAGATAAGTGGAAACTCGTTTGGTTGTGCTGTCAGAGGTTTCGATTTTGACGATGACGAAGACGACAACAACGATAATAATGATAATGATGATGTTCCTTGCAAGAACACTACTACTACTAAAATTCTCAGAGATGAGGAAACCAAGAACCATGTTCACTAA 699 0.4235 MIPSEIDMRGIQYLAPENQFLVPPYNNDNNNNNNNLSCLIHSEIPTFRDNLNTLLTNIPIYSYNNNNFPCALGNDFIVPHNSSCLSSNSTTSDEADELPLSVIDERKQRRMISNRESARRSRMRKQKHLDELWSQVVRLRSENHNLIDKLNNMSESHDRVLQENARLKEEASDLRQMIAEISGNSFGCAVRGFDFDDDEDDNNDNNDNDDVPCKNTTTTKILRDEETKNHVH* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0975 232 Pfam bZIP transcription factor 106 164 IPR004827 GO:0003700|GO:0006355
Amo17g0975 232 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 226 IPR044521 -
Amo17g0975 232 CDD bZIP_plant_GBF1 107 158 IPR045314 GO:0003700|GO:0006355
Amo17g0975 232 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 104 167 IPR004827 GO:0003700|GO:0006355
Amo17g0975 232 SUPERFAMILY Leucine zipper domain 106 155 IPR046347 GO:0003700|GO:0006355
Amo17g0975 232 SMART brlzneu 102 166 IPR004827 GO:0003700|GO:0006355
Amo17g0975 232 Coils Coil 136 184 - -
Amo17g0975 232 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 109 124 IPR004827 GO:0003700|GO:0006355
Amo17g0975 232 PANTHER BZIP PROTEIN (ATBZIP48) 1 226 - -
Amo17g0975 232 MobiDBLite consensus disorder prediction 199 218 - -
Amo17g0975 232 Gene3D - 104 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0975 Amo-Chr17 25022940 25023856 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0975 56 188 bZIP Transcription Factor Family AT3G30530 57.639 3.98e-44 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Amo17g0975 bZIP_1 8.2e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0975 - - aip:107641963 409.453