Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0970 ATGGGTTTTCTAAGTCATCAAACTCATACCGATTCCTTCTTGTTTATTACTACTTTGTTCATATTTGTTAGCATCCATTTGTGTTTGAGCTCCGCGAATGACACAATCACATCAAACACATCCATTGAAGACAATCACACAATAACCTCAAACAACACTAACTTCAAGCTCGGATTCTTCAGCCCTCCAAACTCAACCAATCGTTACGTTGCAATATGGTACCTCTCTGACTCCAACATCGTATGGATAGCAAACAGAGAGCAAGCCGTGAAAGATTCTTCAGGGGTTATCAAGATTCACAAGGATGGAAACCTCGTAGTAATGGATGGAAGAAACTATATAGTTTGGTCAACAAACCTCACATTCTCAACTAAATATGTCACCAATATCTCAAGTGCTCAGCTTCAAGATAAGGGTAACCTTGTTCTTAGGGATGACAACACTGGAGAAACGGTTTGGGACAGTTTCACCCACCCTGCGGATGCAGCCATGCCAATGATGAAAATCACGGCGAACAAGTTCACAGGCAAGAAAATGGAGTATGTTTCTTGGAAATCCCCTACAGATCCTTCTTCTGGAGACTACTCCGTTAGCATGGAGCGGTTGGCCGCTCCGGAACTTTTCTTATGGTACAAGAAAACTAGGCCGTATTACCGAACCGGTCCGTGGAACGGTCGGACTTTCCTCGGCTCTCCGACGATGCTAACAGAGTATCTCTATGGGTGGCGTCTGGACCACGATCCAGATGGAACCAATTATCTAACGTATAATTTCGCTGATCCAGATGCATTTGCTATTGTCTGGATTACTTATGATGGAAAACTTAGGATGGCAAAATTCTTGAACCAGAAGAATTTCGCGACGATTGATATTTCTCCAAAAGACTGTGATTTTTACGGCGCTTGTGGGCCATTCGGAAACTGTGATCCATCTAGCAAACCGATTTGTAGCTGTTTTGAAGGGTTTGAGCCAAGGAATGTGCAAGAATGGAGTAAGAAAAATTGGACTAGTGGTTGTGTGAGGAAGAAAGAGGCACAGCTTCAGTGTGATAGGTTGAAGAATTTGAACAATAATAGTAATAATGGAGTTGATGAAGTGCAACAAGATGGGTTTAAGGTGTTTAATAATATGAAAGTGCCGGATTTCGCTGAGAGATCTGATGATGACCTAGACAATTGCAGAACGAGTTGTTTGGCAAATTGTTCTTGTTTGGCTTATGCTTATGATTCTTATATTGGATGCATGTTTTGGATTACAGACTTGATTGATTTGGAACAATTCTCAATTGGTGGAGTTGATCTCTTCCTTCGTGTCCCTCATTCTCAACTTGCTACAGGTAACAAGGGAAGAAGAGTAAACAAGTCATTAATCATTGCCATTATTGCTGGGGCGATAGGAATAGTTGCCTTAGCAATTTGTGCATACATTACATGGCAAAAATGGACCGCCAAACAAGCTCGAACTCTGTCTCAAAAAAAGACTACTGTTGGAGAACAAAATCAAATGAAACTCGACGAACTACCGTTGTTCGAATTTCAAAAGCTTGCAACTGCTACAAACAACTTTCATGCTGAAAACATGCTCGGGAAAGGAGGTTTTGGTCCGGTATATAAGGGCCATTTGGAAGATGGACAAGAAATTGCAGTGAAAAGATTGTCCAAAGCGTCTGGACAAGGGCTGGAAGAATTTATGAATGAAGTAGTGGTTATATCGAAACTTCAACATCGCAATCTTGTTAGACTTCTTGGTTGTTGCGTCGAACCCGACGAACAAATGTTGGTCTATGAGTTCATGCCAAACAAAAGTTTGGATGCCTTTCTCTTTGATCCACAACGAAGAAAAGTCTTAGATTGGAAAAAACGTTTCAACATAATTGAAGGGATAGCTCGTGGTATACTTTATCTTCACAGAGATTCAAGACTTAGAATCATACACAGAGATCTCAAAGCAAGCAATATCTTGTTGGATGATGCAATGAATCCAAAAATATCAGATTTTGGTTTAGCTAGAATTTTTAGAGGAGATGAAGATCACGAAGCTAGTACAAAAAAAGTTATTGGAACGTACGGTTACATGCCACCTGAATATGCAATGGAAGGATTATTTTCAGAAAAATCAGATGTCTACAGCTTTGGTGTTTTGTTACTAGAGATTGTCAGTGGACGAAAAAACACCAGCTTTTATAACCATCGGCAATCATTAAGCCTTGTGGGATATGCATGGAAGCTATGGAATGAAAATAACGTCATATCATTAATAGATCCAGAGATTATGGATCCAATCTTTGAGAAAAATATTTTGAGGTGCATACACATTGGACTTTTATGTGTGCAAGAATTGACAAAAGAAAGACCAACTATATCCACTGTGGTTTTGATGTTAATAAGTGAGATTACACATCTTCCTCCACCAGGACAAGTTGCATTTGTCCACAAACAAAATCTTTACAATTCAGAATCCTCTCAGAAAAGTCACCCATCCACCAGATCAAACAACAATTTAACTCTTACTGAAATAGAAGGAAGATAA 2529 0.397 MGFLSHQTHTDSFLFITTLFIFVSIHLCLSSANDTITSNTSIEDNHTITSNNTNFKLGFFSPPNSTNRYVAIWYLSDSNIVWIANREQAVKDSSGVIKIHKDGNLVVMDGRNYIVWSTNLTFSTKYVTNISSAQLQDKGNLVLRDDNTGETVWDSFTHPADAAMPMMKITANKFTGKKMEYVSWKSPTDPSSGDYSVSMERLAAPELFLWYKKTRPYYRTGPWNGRTFLGSPTMLTEYLYGWRLDHDPDGTNYLTYNFADPDAFAIVWITYDGKLRMAKFLNQKNFATIDISPKDCDFYGACGPFGNCDPSSKPICSCFEGFEPRNVQEWSKKNWTSGCVRKKEAQLQCDRLKNLNNNSNNGVDEVQQDGFKVFNNMKVPDFAERSDDDLDNCRTSCLANCSCLAYAYDSYIGCMFWITDLIDLEQFSIGGVDLFLRVPHSQLATGNKGRRVNKSLIIAIIAGAIGIVALAICAYITWQKWTAKQARTLSQKKTTVGEQNQMKLDELPLFEFQKLATATNNFHAENMLGKGGFGPVYKGHLEDGQEIAVKRLSKASGQGLEEFMNEVVVISKLQHRNLVRLLGCCVEPDEQMLVYEFMPNKSLDAFLFDPQRRKVLDWKKRFNIIEGIARGILYLHRDSRLRIIHRDLKASNILLDDAMNPKISDFGLARIFRGDEDHEASTKKVIGTYGYMPPEYAMEGLFSEKSDVYSFGVLLLEIVSGRKNTSFYNHRQSLSLVGYAWKLWNENNVISLIDPEIMDPIFEKNILRCIHIGLLCVQELTKERPTISTVVLMLISEITHLPPPGQVAFVHKQNLYNSESSQKSHPSTRSNNNLTLTEIEGR* 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0970 842 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 22 840 - -
Amo17g0970 842 SMART ntp_6 366 438 IPR003609 -
Amo17g0970 842 ProSiteProfiles Protein kinase domain profile. 522 828 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0970 842 Pfam Protein tyrosine and serine/threonine kinase 524 791 IPR001245 GO:0004672|GO:0006468
Amo17g0970 842 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 190 IPR036426 -
Amo17g0970 842 ProSiteProfiles PAN/Apple domain profile. 366 439 IPR003609 -
Amo17g0970 842 Pfam D-mannose binding lectin 80 185 IPR001480 -
Amo17g0970 842 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Amo17g0970 842 Gene3D - 28 158 IPR036426 -
Amo17g0970 842 Pfam S-locus glycoprotein domain 218 325 IPR000858 GO:0048544
Amo17g0970 842 MobiDBLite consensus disorder prediction 818 842 - -
Amo17g0970 842 SMART blect_4 33 159 IPR001480 -
Amo17g0970 842 SUPERFAMILY Protein kinase-like (PK-like) 507 813 IPR011009 -
Amo17g0970 842 CDD PAN_AP_plant 367 439 - -
Amo17g0970 842 SMART serkin_6 522 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0970 842 ProSiteProfiles Bulb-type lectin domain profile. 33 156 IPR001480 -
Amo17g0970 842 CDD STKc_IRAK 528 794 - -
Amo17g0970 842 Gene3D Transferase(Phosphotransferase) domain 1 598 800 - -
Amo17g0970 842 Pfam PAN-like domain 367 424 IPR003609 -
Amo17g0970 842 PIRSF SRK 5 842 IPR024171 GO:0004674
Amo17g0970 842 Gene3D Phosphorylase Kinase; domain 1 496 597 - -
Amo17g0970 842 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 22 840 - -
Amo17g0970 842 CDD B_lectin 41 159 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0970 Amo-Chr17 24882638 24888199 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0970 487 842 Receptor kinase-like Gene Family AT4G11530 53.994 1.86e-123 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo17g0970 PK_Tyr_Ser-Thr 1.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0970 - - gmx:100786846 1154.04