LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo17g0944	ATGGGTTATTATCTTTCCTATGTTGTTGTGTTGGTCTTGTTCATTTTTGTGGGAGTTTCAGTTTCCTTATCTTCTTCACCAATTGAAGATCAGAAGAGAGATAGGGTCACTGATTTGCCAGGGCAACCCAAGAATGTGGGGTTTGCTCATTATTCTGGCTATGTCACTGTGAATGAGAAGAGTGGGAGTGCATTGTTCTACTGGCTCTTTGAGGCTCCGGCGAGCCGCCGACCGGAGAAGAGACCACTGGTTTTGTGGCTCAATGGTGGCCCTGGATGCTCCTCCATTGCTTATGGTGCATCTGAAGAAATTGGCCCTTTTAGGATTAGGCCTGATGGGAAGTCACTTTACTTGAACCCTTATGCTTGGAACAAATTGGCAAACATATTGTTCCTTGATTCTCCTGCTGGTGTCGGATTTTCGTACTCGAATAAGACGACGGATCTGTACACATTTGGTGACCAGAGAACAGCTGAAGATGCATATACATTTCTTGTTAAGTGGTTTGAAAGATTTCCTCAGTATAAGCATAGAGAGTTCTACATTGCTGGAGAAAGCTATGCAGGGCACTATGTTCCTCAGTTGTCTCAAATTGTTTATGAGAGAAACAAGGGAATCAAGAATCCAGTGATAAATTTCAAGGGATTTATGGTTGGAAATGCTGTTACTGATGATTATCATGATTATGTTGGAACATTTGAGTATTGGTGGACTCATGGTTTGGTATCGGATTCCACATACAGGATGCTGAGAATTGCTTGTGATTTCGGTTCTTCACAGCATCCATCAGTGCCTTGCATGCAGGCCCTTAAAGTTGCAGTTGTGGAGCAGGGTAACATTGATCCTTATAGCATTTATACGCAGCCTTGTAACGATACATCGTCACTCAGACGCGACTTGGGGGGTCGCTATCCGTGGATGTCTCGAGCATACGATCCCTGCACTGAGAGGTATTCCGACTTGTATTTCAATCATCCAGAAGTTCAGAAGGCACTTCATGCCAATGTAACCGGAATTCCTTATTCATGGAAGACTTGCAGTGATATTGTGGGGAACTATTGGACTGATTCTCCTCTAACTATGCTTCCTATATATCGCGAACTTATTAGTGCTGGTCTCAAGATATGGGTATACAGTGGAGACACTGATTCAGTGGTTCCAGTCACTGCGACTCGATATTCAATCGACGCATTGAAGCTACCAACCCTCACCAACTGGTACCCTTGGTATGATAATGGCAAGGTTGGTGGTTGGAGTCAAGTTTACAAAGGACTCACATTAGTAACTGTAAGAGGAGCCGGCCATGAGGTTCCGCTTCATCGGCCGCGCCAAGCCTTCATTCTTTTCAGGTCTTTCTTGGAGGACAAGCCAATGCCATCTTCAAGTTAG	1389	0.4442	MGYYLSYVVVLVLFIFVGVSVSLSSSPIEDQKRDRVTDLPGQPKNVGFAHYSGYVTVNEKSGSALFYWLFEAPASRRPEKRPLVLWLNGGPGCSSIAYGASEEIGPFRIRPDGKSLYLNPYAWNKLANILFLDSPAGVGFSYSNKTTDLYTFGDQRTAEDAYTFLVKWFERFPQYKHREFYIAGESYAGHYVPQLSQIVYERNKGIKNPVINFKGFMVGNAVTDDYHDYVGTFEYWWTHGLVSDSTYRMLRIACDFGSSQHPSVPCMQALKVAVVEQGNIDPYSIYTQPCNDTSSLRRDLGGRYPWMSRAYDPCTERYSDLYFNHPEVQKALHANVTGIPYSWKTCSDIVGNYWTDSPLTMLPIYRELISAGLKIWVYSGDTDSVVPVTATRYSIDALKLPTLTNWYPWYDNGKVGGWSQVYKGLTLVTVRGAGHEVPLHRPRQAFILFRSFLEDKPMPSSS*	463

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo17g0944	462	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	11	460	IPR001563	GO:0004185\|GO:0006508
	Amo17g0944	462	PANTHER	CARBOXYPEPTIDASE	11	460	-	-
	Amo17g0944	462	ProSitePatterns	Serine carboxypeptidases, serine active site.	182	189	IPR018202	GO:0004185
	Amo17g0944	462	Gene3D	alpha/beta hydrolase	30	292	IPR029058	-
	Amo17g0944	462	SUPERFAMILY	alpha/beta-Hydrolases	31	459	IPR029058	-
	Amo17g0944	462	Pfam	Serine carboxypeptidase	40	454	IPR001563	GO:0004185\|GO:0006508
	Amo17g0944	462	Gene3D	-	314	350	-	-
	Amo17g0944	462	PRINTS	Carboxypeptidase C serine protease (S10) family signature	119	131	IPR001563	GO:0004185\|GO:0006508
	Amo17g0944	462	PRINTS	Carboxypeptidase C serine protease (S10) family signature	132	142	IPR001563	GO:0004185\|GO:0006508
	Amo17g0944	462	PRINTS	Carboxypeptidase C serine protease (S10) family signature	168	193	IPR001563	GO:0004185\|GO:0006508
	Amo17g0944	462	PRINTS	Carboxypeptidase C serine protease (S10) family signature	425	438	IPR001563	GO:0004185\|GO:0006508
	Amo17g0944	462	Gene3D	-	361	454	-	-
	Amo17g0944	462	ProSitePatterns	Serine carboxypeptidases, histidine active site.	425	442	IPR033124	GO:0004185

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo17g0944	Amo-Chr17	23875234	23879373	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo17g0944	324	458	Calmodulin-binding Proteins	AT2G22960	27.941	4.92e-14	68.6

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo17g0944	K16297		-	gmx:100805722	853.203