Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0928 ATGAATGATTCAACTTTAAATCAGTTGAATGAGAGCGATTTGGATTATTCTTCTGAATCCTATCAAGCGGAAGAGACCAGGTGTGTTGTGGATGAACAATTTGTCCCAAAGATCGGGATGACTCTCAAGACACTAGAAGAAGCTGGAAAGTTCTACAAAAATTATTCCAAACTTGCCGGTTTTTCTACCAAAATAAGGAACATGACTCAGAAGGAAGACGAGATTAAGAATCAACTAATCGTATGCAGCAGAGAGGGGAGGTGGAAATCTAAGATATCTCCCACTCTGAAGACAAATCCTTTAGCCGGCATAAATTGTCCAGCCAGGATCTACGTATACATATTGAAAGATGTCAGTCTTTGTTCTGAATCATTTACACCCCTGCTGTCCAAACTGGGCAAAGATGCTCAAATAATATAG 420 0.3952 MNDSTLNQLNESDLDYSSESYQAEETRCVVDEQFVPKIGMTLKTLEEAGKFYKNYSKLAGFSTKIRNMTQKEDEIKNQLIVCSREGRWKSKISPTLKTNPLAGINCPARIYVYILKDVSLCSESFTPLLSKLGKDAQII* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0928 139 Pfam FAR1 DNA-binding domain 50 112 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0928 Amo-Chr17 23027007 23027747 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo17g0928 FAR1 6.2e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0928 - - aip:107614666 198.749