Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0896 ATGGCTTCTTCAACTTCAACGTGGGTTAGAGGCAAGTGCGTTGGAAGGGGCGCCTTTGGCACCGTTAACGTGGCGGTTACAAAATCAGACGGTTACGTTTTTGCAGTTAAGTCCGTCGATCTTATAACGGCTCCGACGGCTCAGATTGAAGCTTTGGAGAACGAGATTAGGATCTTGAGGCTCCTACCTCCCAGTCCTCACGTGATCACTTTCCTCGGCGATGATGTCACGTGCGAGAGGACCAACGGGGCTTCCACGTTCAGAAACCTGCACTTGGAGTACATGCCACGTGGCACCGTCGCTGATTTGGACCCTGCTGACGTGGACGAACGGTTGGTTCGCCGTTACGCTTCCTGCTTGGTTCACGCGCTGCGCCACCTCCACGCTCTTGGCGTTGTTCACTGCGACGTTAAGGGAAGGAACGTGCTAGTTTCCGACGACGGCGGAGCGGTGAAGCTCGCGGATTTTGGATCCGCTGCGGAATATTCCGGCGAGAGTTGCGTTGGTTCGAGGGGGAGTCCGATGTGGATGGCGCCGGAGGTTGTTCGCCGGGAGTACCAGGGGCCGGAGTCTGACGTGTGGTCGTTGGGTTGCACGGTGATTGAGATGGTCACCGGAAAGCCACCGTGGGAGGATCGCGGCGCTGACACGCTGAGTCGGATCGGGTATTCTAGCGAGTTGCCTGAGTTTCCGACTCGGTTATCGGAACTCGGTCGGGACTTCCTAGAGAAGTGTCTGAGAAGGGAGAAGAGTGAGAGGTGGAGCTGCGATCAGCTTCTGCAGCATCCATTTTTGGTCGGTGAGGGTTCCATTAAGGTTTTGGAATCGTCGCCTCGGTGCATTTTGGACTGGGTTGACTCGGGGTTCGACTCGTACGAAGAAGAAGGAGAGATGAACTGGGAAGGTGAGTGTGTGAGTTCGGCGAAGGGTAGAATTTGTAAATTGGCTACGGGGATAGGGGCAAACTGGGAAACACAGGGATGGATAGTGGTGAGAGCATTGGCATCTGAGTCTGACGAAGAAGCAACGATAATAACAGAAGCAACAGGAAACGGAGAAGAAGGGGTAGTTTCGGAATTCGGAAATGATGTGGCGAGGGTAGAATCGGGAATTGAGGTTGGGGCATGTGGGGAATATTCGGATTTTTGTGGAAGGACAGGAGAGAAAGTTGGAAGGGTAAAATGGGAAAGGCGAAAGAACAACAAAAGGTTGGTGTGGCGGCGGTGGAAGCTCCACCGGCAGGGTGGTGGTTGTAGCAATAAGTGGGAAAATGAGTTGGATAAGAATGGGATTAAAGGAATATTCACAATTTACAGCTTGTATTGTAAAATATTTAATTTGTATTATTATCTAATTTTCTCAGTATTTATTATCAATAAATTATGTCTTTCGAGCACACTTAATTGTTTTACTGTATGCGACATGGAAAATTCGTTAATATTAATTTAA 1449 0.5045 MASSTSTWVRGKCVGRGAFGTVNVAVTKSDGYVFAVKSVDLITAPTAQIEALENEIRILRLLPPSPHVITFLGDDVTCERTNGASTFRNLHLEYMPRGTVADLDPADVDERLVRRYASCLVHALRHLHALGVVHCDVKGRNVLVSDDGGAVKLADFGSAAEYSGESCVGSRGSPMWMAPEVVRREYQGPESDVWSLGCTVIEMVTGKPPWEDRGADTLSRIGYSSELPEFPTRLSELGRDFLEKCLRREKSERWSCDQLLQHPFLVGEGSIKVLESSPRCILDWVDSGFDSYEEEGEMNWEGECVSSAKGRICKLATGIGANWETQGWIVVRALASESDEEATIITEATGNGEEGVVSEFGNDVARVESGIEVGACGEYSDFCGRTGEKVGRVKWERRKNNKRLVWRRWKLHRQGGGCSNKWENELDKNGIKGIFTIYSLYCKIFNLYYYLIFSVFIINKLCLSSTLNCFTVCDMENSLILI* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0896 482 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 14 3 358 - -
Amo17g0896 482 Pfam Protein kinase domain 10 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0896 482 SMART serkin_6 8 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0896 482 CDD STKc_MAPKKK 8 265 - -
Amo17g0896 482 SUPERFAMILY Protein kinase-like (PK-like) 6 279 IPR011009 -
Amo17g0896 482 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 358 - -
Amo17g0896 482 ProSiteProfiles Protein kinase domain profile. 8 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0896 482 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Amo17g0896 482 Gene3D Transferase(Phosphotransferase) domain 1 3 301 - -
Amo17g0896 482 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0896 Amo-Chr17 22167103 22168985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0896 1 373 MAP Kinase Kinase Kinase AT1G07150 56.053 2.11e-135 398
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Amo17g0896 Pkinase 1.1e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0896 - - mtr:MTR_5g071560 456.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0896 17 22167103 22168985 Amo17g0896 17 22167103 22168985 ECH