Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0890 ATGTCGGCACAACCGTGCGCGACAGATATCCTCTCCCGCGCCACCGCATGCCGCGACGGATCCGCGGCGGCGCACCTCAAGTTCCTCTCCATCTTCGTCATCTTCTTCACCAGCATGCTCGGCATGTCCTCTCCCGTCCTCCTCGCCCGTCTCTTCCAAGGAAAGTCGCTCTACGACCGCGCCGTCGCTCTCATCAAGTGCTTCGCCGCCGGCGTCATTCTCTCCACCTCACTCGTTCACGTCCTCCCTGACGCGTACTCCTCACTCGCCGACTGCCGCGTCGCCACGCGCCATCCCTGGCGCGACTTCCCATTCTCCGGCCTCGTCACACTAATCGGCGCACTCCTCGCCCTCGCCGTCGACCTCGTGGCAAGCTCTCACGTCGAGCACGCGCAGTACGCGCCGGTGAAGACGAACGAGAAGGAGTCATCGTCGGTGGAATCGAGAATCGAACTCGGCGGCGGTGGAGGATGTCACGGCGGCGATAGCACCGGAGCGGTGGCGGGGGAAGGATCGGCAGTGACGGATGAGGAAATGTTGTTAAGGTTGAAGCAGAAAATGGTTTCTCAGGTATTGGAGATTGGGATAATATTCCATTCGGTGATAATTGGGGTTACGATGGGAATGTCTCAGAACGTTTGCACTATAAGGCCTCTCGTTGCTGCTTTGGCTTTTCATCAGATTTTTGAAGGGATGGGTCTTGGTGGCTGCGTTGCTCAGGCTGGATTTAGCTTTGGAACAATGGTATATATGTGCTTCATGTTCTCAGTGACAACACCAATGGGTATAGTTTTGGGGATGGCAATATTTTCACTCACAGGGTATGATGATAGTAACCCAAATGCATTAATCATGGAAGGTTTATTAGGTTCTATATCCTCAGGAGTACTAATTTACATGGCGCTTGTTGACCTCATTGCCGTTGATTTCTTTCATAACAAGCTTATGAACTCTAATCCAAAGTTGAAAAAGGCATCTTTTCTTGCCTTAACTCTGGGTTCTGCTGCAATGTCTATTCTTGCCCTCTGGGCTTGA 1035 0.5304 MSAQPCATDILSRATACRDGSAAAHLKFLSIFVIFFTSMLGMSSPVLLARLFQGKSLYDRAVALIKCFAAGVILSTSLVHVLPDAYSSLADCRVATRHPWRDFPFSGLVTLIGALLALAVDLVASSHVEHAQYAPVKTNEKESSSVESRIELGGGGGCHGGDSTGAVAGEGSAVTDEEMLLRLKQKMVSQVLEIGIIFHSVIIGVTMGMSQNVCTIRPLVAALAFHQIFEGMGLGGCVAQAGFSFGTMVYMCFMFSVTTPMGIVLGMAIFSLTGYDDSNPNALIMEGLLGSISSGVLIYMALVDLIAVDFFHNKLMNSNPKLKKASFLALTLGSAAMSILALWA* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0890 344 PANTHER ZINC TRANSPORTER 6, CHLOROPLASTIC 6 344 - -
Amo17g0890 344 TIGRFAM zip: ZIP zinc/iron transport family 14 344 IPR004698 GO:0005385|GO:0016021|GO:0071577
Amo17g0890 344 PANTHER ZINC/IRON TRANSPORTER 6 344 - -
Amo17g0890 344 Pfam ZIP Zinc transporter 25 341 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0890 Amo-Chr17 21510191 21513097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0890 8 344 Inorganic Solute Cotransporters AT2G30080 63.429 5.82e-153 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0890 K14709 - gmx:100797310 491.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0890 17 21510191 21513097 Amo17g0890 17 21510191 21513097 ECH
Amo11g0137 11 1900482 1903256 Amo17g0890 17 21510191 21513097 PCT
Amo01g0489 01 7272844 7274929 Amo17g0890 17 21510191 21513097 PCT
Amo17g0890 17 21510191 21513097 Amo11g0137 11 1900482 1903256 PCT
Amo17g0890 17 21510191 21513097 Amo01g0489 01 7272844 7274929 PCT