Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0886 ATGGAATTCAAGGAATTCATAATCAGAAGCTATGAGGGTCAATCTGATAGAGCCCAGGTTGAAGATCTTGAAAGAAGGTGCAAGGTAGGTCCATCAGAAACCATGCTAGACTCCATGGGTGACCCCATCAGTAGGATCCGGAACAGCCCCATGTACATCATGCTGGTGGCAGAGATGGACAATGAATTGGTTGGTTTCATTCAAGGCTCTATAAAAGTGGTAACACTAGAGTGTCATCCGCCAAAGGGTATTGCAAAGGTTGGCTATGTCCTAGGCCTAAGGGTAGCCCCACAAACTAGGAGAAAAGGCATTGGTTCAAGCCTAATCCAAAGGCTAGAAGAATGGTTCAATTCCAATGATGTGGACTATGCATACGTGGCCACAGAGAAAGAAAACCATGCATCAATAAGCCTCTTCATGAACAAATTTGGTTACACCAAGTTTAGGACCCCAGCTATACTTGTGAACCCTGTCAACAATCACCACTCATTTAGAATCTCTTCCAACATTGACATTGCTAAAGTCAACATTGACAAAGCTGAGTCTCTTTATAGAAGATTCATGGGGACCACTGAATTTTTCCCTAGTGACATTCAAAATGTGCTTAGGAATAAGCTTAGTTTGGGAACATGGGTAGCTACTTTCAAATGGGAAAATGCAAGTTTTGGGCTTAATGGGCCTAATATTGGACAAGTCCCCAAATCTTGGGCCATGCTTAGTGTATGGAAAAGTGGGGATATTTTCAAGTTAAGCATTGGGAGAGCTCCAAATTCTTGCCTGTTTTTTACAAAGACTTGGAGCTTAGTGGACAAAATTTTCCCATGCTTTGGGCTATCAACTATACCTGATTTTTTCAGCCCATTTGGGTTTTATTTCATTTATGGGGTTTACCATGAAGGCCCATGTTCAGGGAAGCTTGTTAGGGCCTTGTGCAAATTTGTTCACAACATGATCTCAAAGTCCAAGGATGAGAATTGCAACAAGATCATTGTGGCTGAAGTTGGTGGAAGAGATGAAGAGCTCAACAATCATATCCCACATTGGAAATTGTTCTCTTGCCCTGACTTGTGGTGCATTAAGGCCTTGAAATCTGAAGGGAAAAACACATTCCATGAATTAGTAACTGACACCCAACCAAGATCCCTCTTTGTAGACCCAAGAGAGGTTTAA 1170 0.4205 MEFKEFIIRSYEGQSDRAQVEDLERRCKVGPSETMLDSMGDPISRIRNSPMYIMLVAEMDNELVGFIQGSIKVVTLECHPPKGIAKVGYVLGLRVAPQTRRKGIGSSLIQRLEEWFNSNDVDYAYVATEKENHASISLFMNKFGYTKFRTPAILVNPVNNHHSFRISSNIDIAKVNIDKAESLYRRFMGTTEFFPSDIQNVLRNKLSLGTWVATFKWENASFGLNGPNIGQVPKSWAMLSVWKSGDIFKLSIGRAPNSCLFFTKTWSLVDKIFPCFGLSTIPDFFSPFGFYFIYGVYHEGPCSGKLVRALCKFVHNMISKSKDENCNKIIVAEVGGRDEELNNHIPHWKLFSCPDLWCIKALKSEGKNTFHELVTDTQPRSLFVDPREV* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0886 389 Pfam Acetyltransferase (GNAT) family 44 145 IPR000182 GO:0016407
Amo17g0886 389 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 389 - -
Amo17g0886 389 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 14 148 IPR016181 -
Amo17g0886 389 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 6 159 IPR000182 GO:0016407
Amo17g0886 389 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 389 - -
Amo17g0886 389 CDD NAT_SF 54 126 - -
Amo17g0886 389 Gene3D - 8 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0886 Amo-Chr17 21324292 21326044 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Amo17g0886 Acetyltransf_1 1.5e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0886 - - gmx:100799507 584.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0886 17 21324292 21326044 Amo17g0886 17 21324292 21326044 ECH