Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0883 ATGGCGGGGTTACTCACTAAAATTCAGAGATATCTGAGGCAAGCACATGTATGGAGGTTTGTTGGTCTGGCTTCAACTACAGTTGGATTATCATGTTATGCTCTCAGCTCCTCCTTTAACCATCTCTTTGGAAGGTGGAACTTTCTCAAAATCTTTATCTATATTGTTTCCAGTATCACCATTTGTTTCATGATTTTATTTGCAAAGTCATGGCAATGCTCCACCACATTGCGATTCAAAGCTCACCTGTCTTTTCTGGCTTTGACAATAACCGCCATCTACTCCTTTTTCTTCGATAAAGATGTCAACGGAAAACCGGATGTTTACGGCCTAATTTCTTGTGCTGCGTTTGCTGTGATGTCYCTGAGCTTGTCGAGGCAGAGCCACTTGGGATTTGAAGTGGATTTGTTATATTTCTTCTTGGGAGCTTTGATTGTACAATTCATGAAGATACATTTGTTTTTAGGTATCTTTGGAGTGGGACTCAGCTACTCCCTCATCATTCTCCGTTCTTCTTTAGATTTGGAAAATGAGCATCAGAGGTTGGATGATCAGTATCACTCAGTTGTGCAAGTTGACTCAGATTCACAACAACAACAACAACAAGAAGCTGCACAAGTGGATTCAGATTCACAAGAAGTCAACACTGATATTGTCATTATGAAGACACAATTCACCGCTTGTATAGATGCTCTTAAGTCATGTGATAGGGAGCTTATTAATATGCTTTCCAATTATGCAAAAGATAACGTCAAGACCTTCATTGAATCCAACCTTGAGGACCATGTCCCGGTTGACAGCAACATGGTGATTGATGCGCTGCCGTCAAACATTATCGATGACCTTCAAGAAGGAGTGAAGTTCATGGTGGCAAATGGACTTCAGAAGGAGTGTTGCGATTCGTATAGCAGCTGCCGCAGGGAATACTTAGAAAAGTTCATTTCRAGTTCAKACTTGAAACTCCCAAATATTGTGAATGTGGTTGAGGRGGAATCAACTGCTCTTGAATTTWAAGTTAGGAATTGGATTACCACTTCAAATTTAGCAATGAGYTTGCTGTTTCCCAARGAAAGAAGACTGTGCGAGCGTATCTTCATGGGGCTCAGCACGGCTACAGATATCGTATTCACCGAAATTTGCAGGGAATTCACGATACATCAATTCAATTTTTCAGATTGCTTTACATTTGAAGTTTTTCCCATGAGCGTAAAAGTTTTCAAGGCACTGAATGACTTGATTCCAGAGTATGAATCATTGTTTTCCCAGAAATGTTGTGATTCAATTAGAAATGAAGCTATCAGTACTTGGAAGAGACTGGGGAAAGCAACCAAAGGGATATTCATAGAGTTGGAGGATTGGATTTGCAATGATGAAGCCATATCAGATGTTCCTGACGAGCTTTATCCGATCTGCAGAAAAGTGATAGAGTGCCTTAATGTTGTTTTCAAAGCTTGGGTCATCCTTCCCCTTGAGAATTTTTTCGAAGAACACCCCATGGTTGTTTATAGAGAGGGAAGCCCGTCTTCATTCTTTATCCAGTTGATTAGGATAATAGGGCTTCTAGAGAAGCATCTGGAAGTCAGGTTCAAAAGCTGTCCGGACCGTGCTCTGCGCTGCATTACAGCCATGAATAATGTAAGGCACATTGAACAGAATGCAAAGAAATGGAACTGGGATACAAACCCCATGTATAATAGTGGCATAATTAGAAAACTGAGTGCAAAAGTCAGACAAAACCTTGAAGACTACCTAAGAATCTCGTGGGATGATGTTGTTGGGCTTTTAAAGCTGGGCGATAACGAAGCATACTCAGCGAAGTCTATGAAAGAGAATCTCAAATTATTCAACTTGCACTTTAAGGAAATATGCAGGGTTCAGTCTACATGGTTTGTCCTAGATGAGCAGCTAAGAAAAGAAATAAGAGAGTCCATAGATAATATCTTGTTGCCAATATATGGAGTCTTTATTGGAAAGTTGTATGATGTTCTTGGTTCTCATGCCAATGAGTATATTGAGTACTCAATGCTTGACATTGATGCTCTACTCAACGATTTCGTTTCGTGGATAACTTAA 2073 0.3994 MAGLLTKIQRYLRQAHVWRFVGLASTTVGLSCYALSSSFNHLFGRWNFLKIFIYIVSSITICFMILFAKSWQCSTTLRFKAHLSFLALTITAIYSFFFDKDVNGKPDVYGLISCAAFAVMSLSLSRQSHLGFEVDLLYFFLGALIVQFMKIHLFLGIFGVGLSYSLIILRSSLDLENEHQRLDDQYHSVVQVDSDSQQQQQQEAAQVDSDSQEVNTDIVIMKTQFTACIDALKSCDRELINMLSNYAKDNVKTFIESNLEDHVPVDSNMVIDALPSNIIDDLQEGVKFMVANGLQKECCDSYSSCRREYLEKFISSSXLKLPNIVNVVEXESTALEFXVRNWITTSNLAMSLLFPKERRLCERIFMGLSTATDIVFTEICREFTIHQFNFSDCFTFEVFPMSVKVFKALNDLIPEYESLFSQKCCDSIRNEAISTWKRLGKATKGIFIELEDWICNDEAISDVPDELYPICRKVIECLNVVFKAWVILPLENFFEEHPMVVYREGSPSSFFIQLIRIIGLLEKHLEVRFKSCPDRALRCITAMNNVRHIEQNAKKWNWDTNPMYNSGIIRKLSAKVRQNLEDYLRISWDDVVGLLKLGDNEAYSAKSMKENLKLFNLHFKEICRVQSTWFVLDEQLRKEIRESIDNILLPIYGVFIGKLYDVLGSHANEYIEYSMLDIDALLNDFVSWIT* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0883 690 PANTHER EXOCYST COMPLEX PROTEIN EXO70 9 685 IPR004140 GO:0000145|GO:0006887
Amo17g0883 690 PANTHER PROTEIN, PUTATIVE-RELATED 9 685 - -
Amo17g0883 690 Pfam Exo70 exocyst complex subunit 340 684 IPR046364 GO:0000145|GO:0005546|GO:0006887
Amo17g0883 690 Gene3D Exocyst complex component Exo70 176 687 - -
Amo17g0883 690 SUPERFAMILY Cullin repeat-like 230 685 IPR016159 -
Amo17g0883 690 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0883 Amo-Chr17 21269385 21271457 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0883 262 690 EXO70 exocyst subunit family AT5G58430 40.583 1.96e-95 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0883 - - aip:107607007 1325.07