Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0882 ATGGATTCGAATTCTCCAGAGGTTGTGCAAGTTAATTCAGGTTCACAAATGGATGTAGATTCACAAGAACAAGAAGAAGACATGCAAGTGGATTCAGATGAAGCCGTGCAACAAGCCAATTCAGAATCGCAAGAAGCGAAAACAGATATTGCTCTGATCATGCCAACACTCACTGCTTATATGAACGTGATAAGGACTAATAATTCCACGGTGATTGATGCGATTCACAACTACTTGGGACAATACCTTCAATCCGAAGAAATCGATGACTTGGACTTCATGGAACATATCTCAATCGATGCCTCCAACTTGGTGATCAACGCGATTCATCCAGATATGATTGATAACCTCCACAAAGAAGTTAAGATGATGCTCGAAGCAGGCTTTGACAGAGAATGTTGCAACGAGTACAGCAAATTTCGCACTAAGTGCTTAGGAAGCTACCTGTCATATATGAAGACTCTGCAGCCACAGCTTGAATTTGAGGAAAATGCTAAGAAGGGGACAAAGTTTTTTAATCATGAGATTAGGGAATGGACTAAAGTTTCAAATGTAATTGTGAGGGTTTTGCTTCCAAGTGAAAGAACACTCTGCCAGCGCGCTTTCTTGCGTTACACGGAAGCTAAGAATCTTGCTTTAATGGAGGTTTGTAGGCCGTTGCTGATTAGAATACTAGATTCCGCGGTTAAACATGCAGTTGAACTTGCTCGCTCCAATAAAATTGAATATTTTTCCAGGATTTCCAGAGTGTTCAAAGCATTTCATGACTTGATTCCGGAGATTGAGTCGCTGTTTCCCAGCCCTGAGCCACTTGGCGATTCGATAAGAAATGAAGTCATCAACACTAGAAAGAGGTTGGGGAAAGCAACTATGGACATTCTTGAGAGGCTAGAGGATTGGATTTACAAGGAGAATGAGATGGCGAGTTTTTATGGAGGGCTTTATCCGATAATCTCTTGGGATGTGATGAACTGCCTGGGGGAAATCTGCGAAGCTTGGACTGTAATCGGCCTTGAGAAAGTTCTAGAAGAGATTCCAATGGTTTCTGATGGAGAAGGAACTGCTTCTTGTTCTTCATTCTCTGTTCAGTTTGATAGGATAATAGAGATGTTAAATAGCCATGTGGAAATCGAATCTAAGAAATATACTGACCCTGCTGAGGGCTATATTTTCATGATGAATAGTCAGAGGTATATACAACAGAAGATAATTGAGTGTCAATCAAAAATGAGCACGATTTTGCTGATGATGAATGGCGCGATCGATGAGAATAATGCCAAGGCGAGACAGAATCTCGAAGATTATCGKWYAAGCTCGTGGGATGAGGTTKTTGGGCTTTTGAAGCAGGGCGACGGAGACGAGCWAAATGAGGTGGAATKTATGAAAGAGAATCTCAAATTGTTCAATGTTCAGTTTAAGGAAATATGCAGGGTTCAGTCTACATGGTTTGTTCTTGATGAKGAGCTAAGAAAGGAAATAAGAGAGACCATAGAGGAAATTTTGTTGCCAAGTTATGGAACCTTCATTGGTAAGTTTCAGAAAGTTCTTGGTTCTGATGCTGATAGGTACATTGAGTATTCAATGTATGACATTGATGCTCTACTCAATGATTTGTTTCGCGGAGGCAGTTGA 1632 0.4075 MDSNSPEVVQVNSGSQMDVDSQEQEEDMQVDSDEAVQQANSESQEAKTDIALIMPTLTAYMNVIRTNNSTVIDAIHNYLGQYLQSEEIDDLDFMEHISIDASNLVINAIHPDMIDNLHKEVKMMLEAGFDRECCNEYSKFRTKCLGSYLSYMKTLQPQLEFEENAKKGTKFFNHEIREWTKVSNVIVRVLLPSERTLCQRAFLRYTEAKNLALMEVCRPLLIRILDSAVKHAVELARSNKIEYFSRISRVFKAFHDLIPEIESLFPSPEPLGDSIRNEVINTRKRLGKATMDILERLEDWIYKENEMASFYGGLYPIISWDVMNCLGEICEAWTVIGLEKVLEEIPMVSDGEGTASCSSFSVQFDRIIEMLNSHVEIESKKYTDPAEGYIFMMNSQRYIQQKIIECQSKMSTILLMMNGAIDENNAKARQNLEDYRXSSWDEVXGLLKQGDGDEXNEVEXMKENLKLFNVQFKEICRVQSTWFVLDXELRKEIRETIEEILLPSYGTFIGKFQKVLGSDADRYIEYSMYDIDALLNDLFRGGS* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0882 543 MobiDBLite consensus disorder prediction 1 19 - -
Amo17g0882 543 PANTHER EXOCYST COMPLEX PROTEIN EXO70 32 540 IPR004140 GO:0000145|GO:0006887
Amo17g0882 543 MobiDBLite consensus disorder prediction 1 43 - -
Amo17g0882 543 Gene3D Exocyst complex component Exo70 23 543 - -
Amo17g0882 543 SUPERFAMILY Cullin repeat-like 67 539 IPR016159 -
Amo17g0882 543 Pfam Exo70 exocyst complex subunit 178 537 IPR046364 GO:0000145|GO:0005546|GO:0006887
Amo17g0882 543 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 32 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0882 Amo-Chr17 21257440 21259403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0882 103 541 EXO70 exocyst subunit family AT5G58430 38.514 3.44e-85 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0882 - K07195 adu:107458298 1030.39