Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0872 ATGGAAGCAGCTCTGTCTACTAGCACAACAATGTCCCCTTCTACCACCAATGGTGGAACCTCATCTTTTGCCAAAACCTGTTTCCATGGGGTTAATGGCATTTCAGGAATTGGTATAGTGTCTATACCATTTGCATTAGCCTCAGGAGGTTGGTTAAGCATAGTTTTTCTGTTCATGATATCCATAGCAGCATGCTACACAGGCTTATTAATCAAAAGATGCATGGACAAAGATTCCACTATTGAATCTCTTCCAGATATTGGTCAAAGAGCATTTGGAGACAAAGGAAGGTTACTTGTAAACATTGCAATGAATTGTGAACTTTATTTGGTCATAACAGGGTACTTGATTCTTGAAGGAGATAACTTGAACAAATTAATATCTCATTTTCATGTGGATATTGGAGGATTGAGAATTACTGGAACACAATTCTTTGTTCTACTTTCAGCACTGATTATTCTCCCAACGGTATGGTTAGAAGATCTAGGTAAACTTCTATCATATGTGTCAGCAACTGGGGCCTTAGCATCAATTATATTTCTATGTTCGTTGTTGTGGAATGGTACAATTGATGGAACAAAACTTCATAGCAAAGGAGTACTCTTTAATTGGAAGGGAGTTCCTGCTGCAGTTAGCTTGTATGCATTTTGTTACAGTTCTCACCCTGTCTTTCCAAGTCTCTACACTTCCATGAAGAACAAGCATCAATTTTCTAATGTTTTGCTGGTGTGCTTCACATTGTGCACTTTAGTATATGCAGCAACAGCAGTTTTGGGATACTTAATGTTTGGATCAGAGGTTGAATCAGAAATAACTCTGAACCTTCCAAAAGAAAAGCTCAGTTCAAAAGTGGCAATATACACAACTTTGGTTAACCCCATAACCAAATATGCTCTGATGCTAAGGCCAATTGTGGATGCCGTAAAAAGCGTGCTTCCAAATCACTACAACAAAAGGCACAAGCTCACACATGTTGTTGTTAGTAGCATCCTTCTCATTTCTACTGTGGTTGTTGCACTCACTGTTCCATTTTTTGGATACCTTATGTCTCTCGTGGGTGCATTACTAAGTGTCTCGGCTTCATTCCTAGTGCCAAGTGTTTGTTACTTGAAGATTTCTGGAACATACAAGAAGTTAGGGTGTGAAATGATCATCAACTACTCTATTTTCTTTGTAGGTACTGCAATTGCTGCCTTTGGAACTTACACTTCACTCCTACAAATAATTAAGCATTTAAAGTTGTAA 1245 0.3831 MEAALSTSTTMSPSTTNGGTSSFAKTCFHGVNGISGIGIVSIPFALASGGWLSIVFLFMISIAACYTGLLIKRCMDKDSTIESLPDIGQRAFGDKGRLLVNIAMNCELYLVITGYLILEGDNLNKLISHFHVDIGGLRITGTQFFVLLSALIILPTVWLEDLGKLLSYVSATGALASIIFLCSLLWNGTIDGTKLHSKGVLFNWKGVPAAVSLYAFCYSSHPVFPSLYTSMKNKHQFSNVLLVCFTLCTLVYAATAVLGYLMFGSEVESEITLNLPKEKLSSKVAIYTTLVNPITKYALMLRPIVDAVKSVLPNHYNKRHKLTHVVVSSILLISTVVVALTVPFFGYLMSLVGALLSVSASFLVPSVCYLKISGTYKKLGCEMIINYSIFFVGTAIAAFGTYTSLLQIIKHLKL* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0872 414 Pfam Transmembrane amino acid transporter protein 20 404 IPR013057 -
Amo17g0872 414 PANTHER OS05G0424000 PROTEIN-RELATED 16 410 - -
Amo17g0872 414 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 16 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0872 Amo-Chr17 21017301 21021540 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0872 17 409 Amino Acid or Auxin Permease AAAP Family AT3G28960 54.962 2.26e-155 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0872 K15015 - gmx:100784690 508.064