Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0871 ATGGAGAGTCTCTCAACCACAACGTCCCCTTCTAGCAACAATAATGGTGGAGGAACCACATCATTTGCCAAGACCTGTTTTCACGGGGTTAATGGAATTTCGGGAATTGGTATAGTGTCTATACCATTTGCATTAGCCTCAGGAGGTTGGTTAAGCATAATTTTTTTGTTCATGATATCCATAGCAGCATGCTACACAGGCTTACTAATCAAAAGATGCATGGACAAAGATTCCACTATTGAATCTCTTCCTGACATTGGTCAAAGAGCATTTGGAGACAAAGGAAGGTTACTTGTAAACATTGCAATGAATTGTGAACTTTATTTGGTCATAACAGGGTACTTGATTCTTGAAGGAGATAACTTGAACAAATTAATATCTCATTTTCATGTGGATATTGGAGGATTGAAAATTACTGGAACACATTGTTTTGTTCTAATTTCAGCACTGATTATTCTCCCAACGGTATGGTTGGAAGATCTAAGCAAGCTTCTATCATATGTGTCAGCAACTGGGGCCTTAGCATCAATTATATTTCTATGTTCATTGTTGTGGAATGGTACAATTGATGGAACAAAACTTCATAGCAAAGGAGTACTCTTTAATTGGAAGGGAGTTCCTGCTGCAGTTAGCTTGTATGCATTTTGCTACAGTTCTCATCCTGTGTTTCCAAGTCTCTACACTTCCATGAAGAACAAGCATCAGTTCTCTAATGTGTTGCTGGTGTGCTTCACATTGTGCACTCTAGTATATGCAGCAACAGCAGTTTTGGGATACTTAATGTTTGGATCAGAGGTTGAATCAGAAATAACTCTGAACCTTCCAAAAGAAAAACTGAGTTCAAAAGTGGCGATATACACAACTTTGGTTAACCCCATAACCAAATATGCTCTGATGCTAAGGCCAATTGTGGATGCCACAAAAAACGTGCTTCCATCACACTACAACAAAAGGCCAAAGCTCACACATATACTAATTAGTAGCATATTGCTCTTCACCACTGTTGTTGTTGCACTCACTGTTCCATTTTTTGGGTACCTAATGTCCCTTGTTGGTGCATTGTTAAGTGTCTCTGCTTCATTCCTAGTGCCATGTGTTTGCTACTTGAAGATTTCTGGAACTTATGGGAAATTGGGATGTGAAATGATCGTCAATTATTCCATAGTGTTAGTAGGAGTTGCAATTGCAGCATTTGGAACTTACACTTCCCTCTTAGAAATAATTAGGCATTTATAG 1236 0.3859 MESLSTTTSPSSNNNGGGTTSFAKTCFHGVNGISGIGIVSIPFALASGGWLSIIFLFMISIAACYTGLLIKRCMDKDSTIESLPDIGQRAFGDKGRLLVNIAMNCELYLVITGYLILEGDNLNKLISHFHVDIGGLKITGTHCFVLISALIILPTVWLEDLSKLLSYVSATGALASIIFLCSLLWNGTIDGTKLHSKGVLFNWKGVPAAVSLYAFCYSSHPVFPSLYTSMKNKHQFSNVLLVCFTLCTLVYAATAVLGYLMFGSEVESEITLNLPKEKLSSKVAIYTTLVNPITKYALMLRPIVDATKNVLPSHYNKRPKLTHILISSILLFTTVVVALTVPFFGYLMSLVGALLSVSASFLVPCVCYLKISGTYGKLGCEMIVNYSIVLVGVAIAAFGTYTSLLEIIRHL* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0871 411 PANTHER OS05G0424000 PROTEIN-RELATED 13 409 - -
Amo17g0871 411 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 13 409 - -
Amo17g0871 411 Pfam Transmembrane amino acid transporter protein 19 403 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0871 Amo-Chr17 20960773 20964149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0871 18 408 Amino Acid or Auxin Permease AAAP Family AT3G28960 55.243 1.59e-156 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0871 K15015 - gmx:100784690 518.85