Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0864 ATGCAGAGGATTTATAGGCCTGCAGAGTTTTGGCAACTGGAAGATCAAGCGCCACAAGCTCTAAAAAAGAGGCATGGATCGTCTGTTTTCACACTCAAGGAGATGGAAGAGGCAACATGTTCATTCAGTGATGATAATCTTCTTGGAAAAGGTGGATTTGGAAAGGTATACAGAGGAACTCTGCAAGGACAGGTTGTAGCAATAAAAAAGATGGAGCTGCCAGCTATTAGAGAAGCTAAAGGAGAGCGCGAATTTCGGGTGGAAGTGGACATATTGAGCAGACTAGACCACCCAACTCTTGTTTCCTTGATTGGCTACTGTGCTGATGGAAAGCACGGATTCTTAGTATATGAGTATATGCAAAATGGGAACCTGCAACATCATCTGAATGTGCCTAATGTAACTGCTAGAGTGTTCGGTACTTTTGGCTATTTTGATCCTGAGTATACATCGACCGGAAAACTCACTCTACAAAGTGATGTTTATTCTTTTGGCGTTGTTCTTCTGGAGATTTTGATTGGACGTAGAGTCGTAGATCTAAACCAAGGTCCAAATGATCAAAACCTTTTGCTCCAGGTGAGACACCTACTAAATGACCAGAAAAAGCTTCGAAAGGTGATAGATGCAGAGATGGCATTAAATTAG 645 0.4202 MQRIYRPAEFWQLEDQAPQALKKRHGSSVFTLKEMEEATCSFSDDNLLGKGGFGKVYRGTLQGQVVAIKKMELPAIREAKGEREFRVEVDILSRLDHPTLVSLIGYCADGKHGFLVYEYMQNGNLQHHLNVPNVTARVFGTFGYFDPEYTSTGKLTLQSDVYSFGVVLLEILIGRRVVDLNQGPNDQNLLLQVRHLLNDQKKLRKVIDAEMALN* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0864 214 ProSiteProfiles Protein kinase domain profile. 42 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0864 214 Gene3D Transferase(Phosphotransferase) domain 1 119 214 - -
Amo17g0864 214 PANTHER OS01G0750732 PROTEIN 3 130 - -
Amo17g0864 214 SUPERFAMILY Protein kinase-like (PK-like) 24 196 IPR011009 -
Amo17g0864 214 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL28-RELATED 134 212 - -
Amo17g0864 214 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL28-RELATED 3 130 - -
Amo17g0864 214 Gene3D Phosphorylase Kinase; domain 1 9 118 - -
Amo17g0864 214 PANTHER OS01G0750732 PROTEIN 134 212 - -
Amo17g0864 214 Pfam Protein kinase domain 43 130 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0864 214 Pfam Protein tyrosine and serine/threonine kinase 144 173 IPR001245 GO:0004672|GO:0006468
Amo17g0864 214 ProSitePatterns Protein kinases ATP-binding region signature. 48 70 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0864 Amo-Chr17 20659181 20660752 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0864 133 211 Receptor kinase-like Gene Family AT3G58690 44.304 5.94e-14 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Amo17g0864 Pkinase 1.6e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0864 - - ahf:112785688 362.844