Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0848 ATGTCGGAGTCGGAGGTTGTTTGCGTCACCGGCGGAAGCGGTTGTATTGGTTCGTGGCTTGTCCACCTCCTCCTCACTCGGGGCTACACCGTTCACGCCACCGTCAAAGATCTCAACGATGATACTGAGACGAAGCATCTAGAAGCTCTTGAAGGAGCGTCCACGCGCCTCCGTCTCTTTCAAATCGACCTGCTCCAGTACGAGACCATCGTCGCCGCCGTGCGCGGATGCTCCGGCGTCTTCCACCTCGCTTCACCCTGCATTGTCGACGAAGTCCATGACCCACAGAAGGAGCTTCTGGACCCTGCGATTAGAGGGACAATGAATGTCCTTGAGGCAGCAAAGGAAGCAGGGGTGAAGCGTGTAGTGGTCACGTCGTCTGTCTCGGCGATTACGCCGAGCCCCGGTTGGCCATCTGATGTTGTCAAGACAGAAGATTGTTGGACTGACACTGAATACTGCAAGCAAAAGGGGCTGTGGTATCCACTATCCAAGACTTTAGCTGAGAAAGCTGCTTGGGATTTTGCAAAGGAGAAAGGCTTGGATGTTGTGGTGGTGAATCCCGGAACTGTGATGGGCCCTGTTATTTCACCCAGACTTAATGCTAGTATGATCATGCTTGTTCGCCTTCTTGAAGGGTGTGATGAAACATATGAGAACTTTTTTATGGGATCAGTCCACTTTAAGGATGTAGCTTTAGCACATATTATGGTGTATGAGAACAAAACAGCAACCGGTAGGCATTTGTGTGTAGAAGCCATCTCTCACTATGGCGACTTTGTGGCGAAAGTTGCGGAGCTTTATCCACAGTACAATGTGCCTAAGATCCCAAGAGATACCCAACCAGGATTGTTGAGGGCAAAGGATGGATCGAAGAAACTCATGGATCTGGGTTTGGAATTTATTCCCATGGAGAAAATTATCAAGGATGCTGTAGAGAGTTTGAAGAGCAAAGGGTTCATTTCTTGA 969 0.4964 MSESEVVCVTGGSGCIGSWLVHLLLTRGYTVHATVKDLNDDTETKHLEALEGASTRLRLFQIDLLQYETIVAAVRGCSGVFHLASPCIVDEVHDPQKELLDPAIRGTMNVLEAAKEAGVKRVVVTSSVSAITPSPGWPSDVVKTEDCWTDTEYCKQKGLWYPLSKTLAEKAAWDFAKEKGLDVVVVNPGTVMGPVISPRLNASMIMLVRLLEGCDETYENFFMGSVHFKDVALAHIMVYENKTATGRHLCVEAISHYGDFVAKVAELYPQYNVPKIPRDTQPGLLRAKDGSKKLMDLGLEFIPMEKIIKDAVESLKSKGFIS* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0848 322 Gene3D - 1 322 - -
Amo17g0848 322 CDD FR_SDR_e 7 299 - -
Amo17g0848 322 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 5 313 - -
Amo17g0848 322 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 315 IPR036291 -
Amo17g0848 322 Pfam NAD dependent epimerase/dehydratase family 7 241 IPR001509 -
Amo17g0848 322 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 5 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0848 Amo-Chr17 20114553 20117598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0848 3 322 Monolignol Biosynthesis Gene Families AT5G58490 79.688 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0848 - - adu:107458329 646.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0848 17 20114553 20117598 Amo17g0848 17 20114553 20117598 ECH