Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0835 ATGTCAATCTCGCCGCCGGAAGCAGCGCCAACGATCCCGTCGGGTAAGGTACGCCACAGCTTCTCTGATGCTTGTCAATTGCGCCGTCAGTTACTGGTGAGGCTCAGGTTGTTGTGTCGTTCCCCGCCTCTACCTCTACGTCTGCCTCGCCAGCGTTGCCGCCGTTCTGCTCTACGCTTTCCTCGGAGCTGTGTCTCTTCTCTCCTCTCCTTCTCTCTCGATTGTCGCCGTTATACTCATGTAGGGATATATGCCCTGGAGGGAAATAAACGGTTCATAGTGAAGGATCCTCGCAGAGCTCATTTGTTTTACCTGCCATTCAGTTCACAAAAGCTAAGAATTACTCTTGCTGAACAAAAGCTTAATGGTAAGCAGATGGAGCAATACCTAGAGAGGTATGTGCATTTAATCGCAAGAAGATATCGATTCTGGAATAGAACTAGGGGAGCAGACCATTTTCTTGTTGCTTGTCATGACTGGGTGAATGAAGAAGAAGCCTCCCTCTTTGATGTGCTACAGTTATTACTTGCAAGTGTTATATTTGTATCATTATTTCAAAAACTTCCCAAAGTGAGTTTTGGAACCATTGGAGACTATGTTCTTTTTCTTGCACGTAGTAGTATAAAGATTTGA 633 0.4566 MSISPPEAAPTIPSGKVRHSFSDACQLRRQLLVRLRLLCRSPPLPLRLPRQRCRRSALRFPRSCVSSLLSFSLDCRRYTHVGIYALEGNKRFIVKDPRRAHLFYLPFSSQKLRITLAEQKLNGKQMEQYLERYVHLIARRYRFWNRTRGADHFLVACHDWVNEEEASLFDVLQLLLASVIFVSLFQKLPKVSFGTIGDYVLFLARSSIKI* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0835 210 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 86 162 IPR004263 GO:0006486|GO:0016757
Amo17g0835 210 PANTHER GLYCOSYLTRANSFERASE FAMILY EXOSTOSIN PROTEIN 86 162 - -
Amo17g0835 210 Pfam Exostosin family 90 176 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0835 Amo-Chr17 19696820 19698511 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0835 158 189 Inorganic Solute Cotransporters AT1G01790 81.250 4.05e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0835 - - aip:107609918 371.318