Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0832 ATGAGATACACTTCACTGCTTAGAAGTCCAAAGAAAGAGGAAGAACAAGAAGTGCCAGAAGCTACTTTCTCCTCCTCCATATTACCCTTTTCCAATAACCACCAACTACTATACCATGATAATGATGATGAAGAATTCAGTATCTTGGAGCAACTTGAAGGAGTCTTGGACGTTGAAGAAGAAGAAGAAGAAGAACAAAAGTTGTTACCATCTCCACAGCAGGGAATGGTAACTAGTTGTAGTGGCGATGATGAAGAGCTTCGTTGGGATTTCATGGAATGGGAGGAGGATCATCATCGATTCCCAGAAGCAGAAAATGAATTGAAGGTAGTAAGCAATAATAACAAGTGCCTAATGGAGGAGGAGGTGAAGAAAATGGTAGTAAAGAGGGAAGAAGAAAGTAATAACAATAATGTTGGGTTTTGGGAAGTGGAAGATGAAAAGATGGTGGCTTTGAATTTGAATTTGAACTATCAAGAGGTTTTGGATGCTTGGTCTGACCGTGGCTCTCTTTGGGCTGATGACTACTCACTTTCATTGGCAACCACCAACAATGGCTACTACTATATGGGAGAAGTGCCAGTATTAGAAGAAGAAAGAACAAGAAGGGAAGCAAGTGTTCTAAGGTACAAAGAGAAGCGCCAGAACAGATTGTTCTCCAAGAAGATAAGATACCAAGTTCGGAAACTAAACGCAGATAAAAGACCAAGAATCAAGGGTCGCTTTGTGAAGAGACATTGA 741 0.4062 MRYTSLLRSPKKEEEQEVPEATFSSSILPFSNNHQLLYHDNDDEEFSILEQLEGVLDVEEEEEEEQKLLPSPQQGMVTSCSGDDEELRWDFMEWEEDHHRFPEAENELKVVSNNNKCLMEEEVKKMVVKREEESNNNNVGFWEVEDEKMVALNLNLNYQEVLDAWSDRGSLWADDYSLSLATTNNGYYYMGEVPVLEEERTRREASVLRYKEKRQNRLFSKKIRYQVRKLNADKRPRIKGRFVKRH* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0832 246 MobiDBLite consensus disorder prediction 1 19 - -
Amo17g0832 246 PANTHER CCT MOTIF FAMILY PROTEIN 1 246 - -
Amo17g0832 246 Coils Coil 49 69 - -
Amo17g0832 246 MobiDBLite consensus disorder prediction 1 25 - -
Amo17g0832 246 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 1 246 - -
Amo17g0832 246 Pfam CCT motif 203 245 IPR010402 GO:0005515
Amo17g0832 246 ProSiteProfiles CCT domain profile. 203 245 IPR010402 GO:0005515
Amo17g0832 246 Coils Coil 101 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0832 Amo-Chr17 19683345 19685102 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0832 145 245 C2C2-CO-like Transcription Factor Family AT1G25440 44.915 1.17e-20 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Amo17g0832 CCT 2.6e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0832 - - aip:107608058 462.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0832 17 19683345 19685102 Amo17g0832 17 19683345 19685102 ECH
Amo17g0832 17 19683345 19685102 Amo07g1013 07 18910375 18912229 hybridization