Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0812 ATGAAGCTTATGTCCATCCAAATTCCAAGATGGCTGATGCATCCAGAGCCGTGGAGATTCATTGGTTTAACTTCATCCATAGTTGGACTGCTCTGTTACGCTCTCAGCACCTCTTTCAACTTCCTATTCGGAAAATGGAACTTGACCAAAATGTTTATATACGTTGTTTTCAGTATTATAATTTGCCTTGCCACATTCTTTGCCAAGGTATGGCAACATTCTTCAAGCCTCCGATTCAGAGCTCACATGGCTTTTTTAGTTCTTACAGTTACCTCTGCTTACTCATTCTTTTTCGACAAAGCCGTGAACGGTAAACCAGATGCGTTTAGCCTTCTATCTTGTGCCGCTTTTGCTATGATGTCGCTCAGTTTATCGAGACAAATTCACTGTGGATTCGAAGTGGATCTGCTATATTTCTTTCTTGGAGTATTGATAATACAACTCATGAAACTAAGATTGTTGTTAGGCACAATTGGAGTTTGTTTCAGTTATTTCCTTGTTATTCTTCGATCCTCTTTGGATTCCCAATCAGAAAACGATGATCTCCAACTGGAACATCAAGATCATATAGCCATTAGAGTTGATTCACAACAATCAAATAATGATTTACAACTCGTGGCTTGTATTGAGGCCCTTCGGAACAGAAACTCTGATCTGATTCAAATTATTTCGGAGCAGGTGAAAGAACAAAACAAAGACCACAAACCGTTGACCAACGCGGAAGAAGAAAATAACTCCCAAGAGGATGAGGAACAGATTCCGGTGGTGGTGGTGCCGGTGATTAGCTATGACGTCAAGATCGAGTCGCTTCTGGCTGAGACGATTAGCGACCTCCACAAGATTGCACAGCAGACGGCGGTGAACGGAGGATTTGGTGAGCAGTTCATACAAGTGTATGGAAGTTGCCGGCGGGAGTTCTTGGAGGAGAGCCTCACTAGCTTGGGGTTGAAGAAGCTGAGTACCGATGAAGTTCACAGCATGTCATGGAAGAACCAGAGGGACACGGCGGTGAGGTGGATCAAGGCCTCCAACGTCTGCCTCAAGATCTTGTTTGACGGAGAGCGCAGACTCTGCGGCAGAGTCTTCTTGGGATTCCCCGCCGCGGCGGATCTCTCGTTCATGGAGATCTCCGGCAAAACTGCCACCTGGCTTCTAGATTTCGCAAACGCCGTAGCAACAGCGAGCCCCTCGCCAGAGCGGCTGTTCATGATCCTTGACTTGTTTGAGGCATTGCGTGACATGATTCCGGACTTTGAAAGGATCTTTCAGGATCAGATGAGAAATGAAGCGGTTACCATTTGGAAGAAGTTGGGCGAAGCAATTTGGAAAAATTTCATGGAGTTAGGGTATGCGCTTATTCGCAATCAAACACCGCTGACGATGACTCCTATTGGCGGCACCATCCATTCCCATACTCGCTACTTGATGAACTACCTCCTTATTGCTTGTGATTCACGTCAGACTTTGGAGCAAGTTTTTAAAGAGAACATGCATTTGTTGAAAGAGTATCCTGAGCTTGATGAGAGAGTTGGATCCAATTCTTCGTCTATGCAAACTGTAATCAATTGGATTATGGAAATGTTTGACCGTAATTTGGAGGCAAAGTCAAAAACTTTTGAGGACCTTGCTTTAAGCCATGTTTTCCTGATGAATAACCGACACTACATGGTTCAAAAGGCGAGAAATAGAGAATTGGGAATCGTTTTGGGTGATGATTGGTTCCAGAAACAATCTGAAAAAATTAGGCAATACCTTGCTGGGTATCTAAGCAGTTCATGGGACAAGGTGCTCGAGATTTTGAAACTTGATGGTAGTAGTGACAGCATCCAAACTCGGCCTAATGGTGCGGCAAAGGCAATGAAGAAGAAGCTGAAGATGTTCAACGTGGAGTTTGAGAATATATGCCGGGTTCAGTCTTCTTGGTATGTAGATGAGAAGCTAAGGCAAGATATAATGATTGTACTTGTGAAGACTCTTTTGCCTGCATATGGAAGCTTCATTAGAAGGTTCCAAAGTGTTGCCAAACTTGGCAAGAATGCTGATAAGTATGTTAAGTATGGAGACATTGAAGCAAAACTGAACGATTTGCTTGGAGGTGTTAGTGCATCAACTAGTCACCAAAAGTAA 2127 0.4372 MKLMSIQIPRWLMHPEPWRFIGLTSSIVGLLCYALSTSFNFLFGKWNLTKMFIYVVFSIIICLATFFAKVWQHSSSLRFRAHMAFLVLTVTSAYSFFFDKAVNGKPDAFSLLSCAAFAMMSLSLSRQIHCGFEVDLLYFFLGVLIIQLMKLRLLLGTIGVCFSYFLVILRSSLDSQSENDDLQLEHQDHIAIRVDSQQSNNDLQLVACIEALRNRNSDLIQIISEQVKEQNKDHKPLTNAEEENNSQEDEEQIPVVVVPVISYDVKIESLLAETISDLHKIAQQTAVNGGFGEQFIQVYGSCRREFLEESLTSLGLKKLSTDEVHSMSWKNQRDTAVRWIKASNVCLKILFDGERRLCGRVFLGFPAAADLSFMEISGKTATWLLDFANAVATASPSPERLFMILDLFEALRDMIPDFERIFQDQMRNEAVTIWKKLGEAIWKNFMELGYALIRNQTPLTMTPIGGTIHSHTRYLMNYLLIACDSRQTLEQVFKENMHLLKEYPELDERVGSNSSSMQTVINWIMEMFDRNLEAKSKTFEDLALSHVFLMNNRHYMVQKARNRELGIVLGDDWFQKQSEKIRQYLAGYLSSSWDKVLEILKLDGSSDSIQTRPNGAAKAMKKKLKMFNVEFENICRVQSSWYVDEKLRQDIMIVLVKTLLPAYGSFIRRFQSVAKLGKNADKYVKYGDIEAKLNDLLGGVSASTSHQK* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0812 708 Coils Coil 209 229 - -
Amo17g0812 708 SUPERFAMILY Cullin repeat-like 253 696 IPR016159 -
Amo17g0812 708 Pfam Exo70 exocyst complex subunit 338 693 IPR046364 GO:0000145|GO:0005546|GO:0006887
Amo17g0812 708 PANTHER EXOCYST COMPLEX PROTEIN EXO70 26 697 IPR004140 GO:0000145|GO:0006887
Amo17g0812 708 Gene3D Exocyst complex component Exo70 186 706 - -
Amo17g0812 708 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 26 697 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0812 Amo-Chr17 19256342 19258694 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0812 249 703 EXO70 exocyst subunit family AT5G58430 51.620 1.36e-148 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0812 - K07195 aip:107608062 1363.21