Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0807 ATGGCTGAGAACAACGGGGAAGAGAAATTACTCGCTGTGGCGCGACATATAGCTAAGACGCTGGGCCACAACACCAACATGGCTGATGATATACTCCAAATATTTTCGAATTTTGATGGAAGGTTCTCGAAGGAGAATTTAGCAGACAAGGTTGCAGATGGTGATCCCAGGGCCTGCGCCGCACTTGATCATTCCCTGAAGTCTCTTGACCGTCGGATCTCACAGTTTGTGTCATCCGACCGTCCGATCTGGGCCGACTCCGCCGACGCTGTTGCTTTTCTTGACGCCGTTGACGAGCTCGTCGCCGCCGTCGCCGAGTGGTCGCAGCTCTCAACAGACAAGGCTTTTGGCGCGTGCCTCGCACGTGCCGAGGACATGCTGCAGCACGCCATGTTCCGACTCGAGGATGAGTTCCGGTCGCTCATGGAGCGCGCTGGAGAGTCTTTTGACCTGACTCCGCCGTACCGAAACGGCGTCGAGTCGGTGGAGAATATTCCATTCGATTCGGAGGAAGAGGAGAACGAGCTGGAGACGGCAGTGAACGACGGAGCAGAAGAGGATCAGATCCCGGTGGCGCTGCCGGTAACGGACTACGACATCGTAATCGACGCGCTCCCCGCGGGGACGATCAACGACCTGCACGAGATCGCGCGGCGCATGGTGGCCGGAGGTTTTGGGAAAGAGTGCTCGCACGTATACAGCAGTTGCAGGAGGGAGTTCTTGGAGGAGAGTCTCTCACGATTAGGGTTACAGAAGCTGAGCATCGAGGAGGTTCACAAGATGCCATGGCAGGACCTCGAGGACGAGATCGAGAGGTGGATTAAGGCCTCCAACGTCTCCCTCAAGATCCTGTTCCCGAGTGAACGAAGATTATGCGACCGTGTGTTCTTTGGATTCTCCGCCGCTGCTGACCTCTCCTTCATGGAGGTTTGCCGCGGATCTACAATTCAGCTTCTGAATTTCGCGGACGCTGTCGCTATCGGGAGCCGCTCGCCTGAGCGGCTGTTTAGGATCCTCGACGTGTTTGAAACTTTGCGTGACCTCATTCCGGAATTTGAAGCCCTGTTCTCGGATCAGTACAGCGTTTCGCTCAGGAACGAAGCAATTACTATTTGGAAGAGGTTGGGGGAAGCAATTAGGGGAATTTTCATGGAGCTGGAGAATCTAATTCGCCGCGATCCTGCTAAGGTTGGGGTTCCCGGTGGGGGCCTACATCCAATCACACGCTACGTGATGAACTACCTACGCGCTGCTTGCCGGTCACGGCAAACATTGGAGCAAGTTTTTGAAGACTATGGACATCCGTTGAAGGATTACCCTAAGCTTGATGATAGAGTCGCACCCAATTCTTCACTCTCTGTGCAAATGGATTGGATAATGGAGCTGTTGGAGAGCAATTTGGAGGCAAAGTCCAAAATCTACAATGATCCTGCATTGTGCTATGTCTTCTTGATGAACAATGGGAGGTACATTGTTCAGAAGGCGAAAGATAGTGAATTGGGAACTCTCTTGGGCGACGATTGGATCCGAAAACACACCGCAAAAGTTAGGCAGTACCATGTGCAATACCAGAGGAGTTCGTGGAACAAAGTTCTGGGGATTTTAAAGCTTGATGGTAGTAGTAACGGGTCATTGGGGCCTAATGGTCCAGCAAAGTCAATGAAAGAGAAACTAAAAATGTTCAACACACAGTTTGAGAATTTATGCAGGGTTCAGTCTTCTTGGTTTGTTTTCGATGAGCAGCTTAGGGAAGAAATAAGAATTGCCCTTGAGAAGATCTTGTTGCCTGCGTACGGAAGCTTCATTGGAAGGTTCCATACGGAACTTGGCAAGAATGCTGATAAGTACGTTAAGTATGGAGTAGAGGACATCGAAGTAAAGCTCAACGATTTATTTCAGGGTAGCAGTGGATCAACCGGTAGCCGAAAGTGA 1932 0.5129 MAENNGEEKLLAVARHIAKTLGHNTNMADDILQIFSNFDGRFSKENLADKVADGDPRACAALDHSLKSLDRRISQFVSSDRPIWADSADAVAFLDAVDELVAAVAEWSQLSTDKAFGACLARAEDMLQHAMFRLEDEFRSLMERAGESFDLTPPYRNGVESVENIPFDSEEEENELETAVNDGAEEDQIPVALPVTDYDIVIDALPAGTINDLHEIARRMVAGGFGKECSHVYSSCRREFLEESLSRLGLQKLSIEEVHKMPWQDLEDEIERWIKASNVSLKILFPSERRLCDRVFFGFSAAADLSFMEVCRGSTIQLLNFADAVAIGSRSPERLFRILDVFETLRDLIPEFEALFSDQYSVSLRNEAITIWKRLGEAIRGIFMELENLIRRDPAKVGVPGGGLHPITRYVMNYLRAACRSRQTLEQVFEDYGHPLKDYPKLDDRVAPNSSLSVQMDWIMELLESNLEAKSKIYNDPALCYVFLMNNGRYIVQKAKDSELGTLLGDDWIRKHTAKVRQYHVQYQRSSWNKVLGILKLDGSSNGSLGPNGPAKSMKEKLKMFNTQFENLCRVQSSWFVFDEQLREEIRIALEKILLPAYGSFIGRFHTELGKNADKYVKYGVEDIEVKLNDLFQGSSGSTGSRK* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0807 643 PANTHER EXOCYST COMPLEX PROTEIN EXO70 30 633 IPR004140 GO:0000145|GO:0006887
Amo17g0807 643 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 30 633 - -
Amo17g0807 643 Pfam Exo70 exocyst complex subunit 271 630 IPR046364 GO:0000145|GO:0005546|GO:0006887
Amo17g0807 643 Gene3D Exocyst complex component Exo70 83 642 - -
Amo17g0807 643 SUPERFAMILY Cullin repeat-like 84 632 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0807 Amo-Chr17 19098980 19101482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0807 1 636 EXO70 exocyst subunit family AT5G58430 70.736 0.0 909
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0807 K07195 - gmx:100803694 1020.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0807 17 19098980 19101482 Amo07g1037 07 19415028 19417682 hybridization