Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0806 ATGACACCTCTATCTGTCCCAATTCCAAGTTGGCTTATGCACCAAATGCTATGGAGATTCCTTGGTTTTGCTTCATCCATAGTTGGATTACTCTGTTACGCTCTTAGTAGATCCTTCAACTTTCTATTCGGAAAATGGAACTTGGCGAAAATCTCTATTTACATTGTTTTCAGTCTTATAATCTGCCTTGCCACTTTCTTTGCCAAGATATGGCAACACTCTGCAAGTCTCCGATTGAGAGCTCATATGACATTTTTAGTTCTGACCGTTACTTCTGTTTACTCATTCTTTTTCGATAAAGCTGCGACTGGGGATCCGGATGCATATAGCATAGGTTCTTCTGCTTCTTTTGCTATAATGTGGTTTAGTTTGTCAAGACAAATTCATTGTGGATTTGAGGTAGACATGTTATATTTCTTTCTGGGAGTTCTCATAATACAACTGATGAAGATAAGATTCTTGTTGAGTATAGTTGCGATATGTTTCAGCTATTTCCTCATCATTCTTCGATCCTCTCTAGATGCATCAACAGTCACAGATAGTGAATATTTGGAACTCCATGACCAAAATCATGTGTCAATTCAAGTGGAATCTGATTCACAACAATCCAACATTCATAGAATCATCATGACAAAGCTCATGGATTGTGTTGAGGCGCTTCAGAAGAGAAAAGCTGCACTAGTGCAAACCATTTTTGAGGAATACAATAATGCTACTAATAACACTATGTTGGTGACTGATTACAATTTCTTGATTGATACGCTACCACAGGGAGTTGTAAATGACCTTCATGAAGCTGTCAAATCTGCAGTGGCTTTTGGATTGGTGAAGGAATGCTCTGATGCCTACATCGATTGCCGGAGGGAATTCTTGGAGGAGTGTCTAGCAAGATTGTTGGAGTTGGACACTGTCAAGATTGACCACCCTAACACACTACCAACTCCATATTTCATGGTTAAGAGATGGGCTGAAACCTGCAATGTTGCATTCAGAATACTGTTCCCATTCGAAAGACGACTCTGCGATCGTGTCTTCTTTGGGCTACGCTCAGTTTCTGATGTTTGTTTTGCAAATATTTGCCGGGAATCCGCGACTCAGCTGTTAAATTTTGCTGAAGCCTTTACAAGTGTGAGCAGTTCATTTGATCAAATATTCATCATTGTTCACATTTTTCGGGCATTGTGTGACCTGATTCCACACTTGCAGACATTGTTTTGTGATAGCCTCACTATGTTCTTGGTGAAGGAAGCTATTACAATCCAGAACAACTTGAGAGAAGCAATAGAGGGTTGTTACACGGAGGTGAAGAATATGATTTTCCGTAGTAAGAAGGCTAAGTTTGTTTTTCCCAATGGCGGAATTCATCCATTAACAATGGATGTCCTGGCATATGTCGAGTTATTTTGCGAGCCATTTTTACAAAAATATGTGCAGGGTTCTGATAGAGCTGGAACATCGTTTTCATTCTCTGTGGAGATGGTTTCTATGTTGAAGATTTTAGAGAGAAAACTGAGAACTAAATCCAAGAACTACAAGGATCCTACTTTGTGCTATTTCTTCATGATGATTAATAGAAGGTACATACAAAACTTTGTAAAACAACGGCATTTCGTAACCCATTTGAGCAATGATTGGGTCCAAAATAATACACAGAAAGCTGAGCAAAACCTTGAGCTCTATTACAAAAGCTCATGGAACATGGTGGTTGATTATCTGAAGCTGTACAACGATGAGTCTTTGGTGCCTGCTGTTCCTGCTGAATCAATGAAAGAGAAACTTATTTTGTTCAATTCACACTTCAGGAAGATATGCACTCTTCAATCTACATGGTTTGTTGGTAAAGAGCAACTTAGGAAAGAAATAATAACATCCGTAGAGAACATGTTGCTTCCAGCATATGGAAACTTCATTGGGAAGTTCCATAATGTTCTTGCTGCAGATGCATATGAGTATATAGAGTACGGAATGTTTGATATACAAGCTCGACTTAACGGTTTATTTAGAGGAAGTATGAATTAG 2019 0.3883 MTPLSVPIPSWLMHQMLWRFLGFASSIVGLLCYALSRSFNFLFGKWNLAKISIYIVFSLIICLATFFAKIWQHSASLRLRAHMTFLVLTVTSVYSFFFDKAATGDPDAYSIGSSASFAIMWFSLSRQIHCGFEVDMLYFFLGVLIIQLMKIRFLLSIVAICFSYFLIILRSSLDASTVTDSEYLELHDQNHVSIQVESDSQQSNIHRIIMTKLMDCVEALQKRKAALVQTIFEEYNNATNNTMLVTDYNFLIDTLPQGVVNDLHEAVKSAVAFGLVKECSDAYIDCRREFLEECLARLLELDTVKIDHPNTLPTPYFMVKRWAETCNVAFRILFPFERRLCDRVFFGLRSVSDVCFANICRESATQLLNFAEAFTSVSSSFDQIFIIVHIFRALCDLIPHLQTLFCDSLTMFLVKEAITIQNNLREAIEGCYTEVKNMIFRSKKAKFVFPNGGIHPLTMDVLAYVELFCEPFLQKYVQGSDRAGTSFSFSVEMVSMLKILERKLRTKSKNYKDPTLCYFFMMINRRYIQNFVKQRHFVTHLSNDWVQNNTQKAEQNLELYYKSSWNMVVDYLKLYNDESLVPAVPAESMKEKLILFNSHFRKICTLQSTWFVGKEQLRKEIITSVENMLLPAYGNFIGKFHNVLAADAYEYIEYGMFDIQARLNGLFRGSMN* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0806 672 PANTHER PROTEIN, PUTATIVE-RELATED 10 668 - -
Amo17g0806 672 SUPERFAMILY Cullin repeat-like 238 667 IPR016159 -
Amo17g0806 672 Pfam Exo70 exocyst complex subunit 320 664 IPR046364 GO:0000145|GO:0005546|GO:0006887
Amo17g0806 672 PANTHER EXOCYST COMPLEX PROTEIN EXO70 10 668 IPR004140 GO:0000145|GO:0006887
Amo17g0806 672 Gene3D Exocyst complex component Exo70 173 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0806 Amo-Chr17 19093584 19095811 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0806 245 670 EXO70 exocyst subunit family AT5G58430 41.475 1.10e-106 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0806 - - aip:107607033 1194.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0806 17 19093584 19095811 Amo07g1038 07 19418997 19424265 hybridization