Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo17g0802 | ATGCCAACCCAGAATTCCTACCATCTAAACCAGAAAAGGCTATGGAGATTTGTGGGATTTATGTCAAGTGCCAATGGATTTCTGTGTTATGCTAAGAGTTCCTCTTTCAAACATCTATTTGGGGAGTGGAACTTGTTGAAGATCATTCTTTACACCCTGTTAAGTTTCAGCATCAGCACCATCATGCTATTTCCCAAAAAATGCAGGCTTTCAAGGAGTTTCTTGCTTAAAGCTTATGTGGGTGTTCTGGTTTTGCTTCTAACCTCTCTCTACTCATTTTTCTCTGACAAATCTGACAATGGAAAACCAGACTTACTAAGCATGATTTCGAATGTTTCTTTCGCCTTGATGTCTTTGTCCCTGTCAAGGCAAATTGATCTTGGCTTTGAGGCAGAGCTTCTCAACTTCTTCCTTGGATGCCTAACTATTCAACTCATGAAGATCAGCTTGATGCTCTCCATCGTTGCAGCCATCTTTTGTTACACTCTCATGATTCTTCGTTCCAAATGGGAATCTCAATCGCATGTGAGAACACTAAGAATGCAAGACCATGTAACAGTAGATATTGACGCTGAAAATGATGACTACTTAAATGCCTTCCAATGCAGTTACGACCATGGCAAAAAACAAATGCAGGATGATGGATACAGTTGGAGAAAATATGAAGAGAATCCATTGAGAAGAAGGGGAAATCAGATAAGCTTCTACAGATGCTCACACCCGAATTGCAAGGTTAAGAAGAAAGTAGAGAGAACAATAGATGGGGAAATTATTCATGTAAACTACAAAGGTACTCATGCCCACCGTAATTGCAAGCCTAAATTTCCTATAAAGAGGAACTCATCATCTGAATCTTTTTATTCACTTCTACCTTCAGAACCTTCCCATACTAAAATTATAGATCAATCATTGGCCTTCAATGGCGATGGACAACTGGATCATGATCCGGCACCAGAGAGCTCATCATTATCAATATGA | 978 | 0.3957 | MPTQNSYHLNQKRLWRFVGFMSSANGFLCYAKSSSFKHLFGEWNLLKIILYTLLSFSISTIMLFPKKCRLSRSFLLKAYVGVLVLLLTSLYSFFSDKSDNGKPDLLSMISNVSFALMSLSLSRQIDLGFEAELLNFFLGCLTIQLMKISLMLSIVAAIFCYTLMILRSKWESQSHVRTLRMQDHVTVDIDAENDDYLNAFQCSYDHGKKQMQDDGYSWRKYEENPLRRRGNQISFYRCSHPNCKVKKKVERTIDGEIIHVNYKGTHAHRNCKPKFPIKRNSSSESFYSLLPSEPSHTKIIDQSLAFNGDGQLDHDPAPESSSLSI* | 326 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo17g0802 | 325 | Pfam | WRKY DNA -binding domain | 213 | 268 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Amo17g0802 | 325 | MobiDBLite | consensus disorder prediction | 306 | 325 | - | - | |
Amo17g0802 | 325 | ProSiteProfiles | WRKY domain profile. | 207 | 268 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Amo17g0802 | 325 | PANTHER | WRKY FAMILY TRANSCRIPTION FACTOR | 5 | 282 | - | - | |
Amo17g0802 | 325 | SUPERFAMILY | WRKY DNA-binding domain | 209 | 269 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Amo17g0802 | 325 | SMART | WRKY_cls | 212 | 270 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Amo17g0802 | 325 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 5 | 282 | IPR044810 | GO:0003700 | |
Amo17g0802 | 325 | Gene3D | WRKY domain | 200 | 272 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo17g0802 | Amo-Chr17 | 18908524 | 18909681 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo17g0802 | 213 | 268 | WRKY Transcription Factor Family | AT3G01080 | 53.571 | 2.96e-15 | 73.6 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Amo17g0802 | WRKY | 7.1e-16 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo17g0802 | - | - | ccaj:109792596 | 379.793 |