Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0801 ATGAAGCTCATCGAAATTAGGAGATGGCTGACGCAGCCACATGTATGGAGGTTTGTTGGTTTGGGTTCATCAGTAGTCGGTTTATTCTGTTACGCAGTTAGCTCCTCCTTCAACAATCTGTTTGGAGAGTGGACCTTTCTGAAAATATTTTTTTACACTCAACTCAGTTTAATCATCTGCATTGCAATCTTTTACGCTAAAGTTTGGCAAAGTTCAAGGAGTCTCCGGTTCAAAGGTAACATGGCACTTTTAGTGTTAACCATAACCTCTGCTTACTCCTTCTTCTTGGATAGCAAAGCTGTAAAGAAGAAACCAGACGCATTTAGCTTGATATCATGTCTTGCGTTTTCTATCATGTCGCTTTGCTTGTCAAGACAGATTCCTTGCGGATTTGAAGTGGATCTGATGTATTTCTTTCTCGGAGCTTTAATAGTGCAACTCATGAAGATAAAGCTATGGTTAGGTATTCTTGGAGTAGGATTCAGCTATACCCTCAACATTCTTCGTTCTTCTTTAGATGAGAACTTGCATGAAGGAGCAGGACTCCAAGAAGATCAACGTAATGTCGTAATCCAAGTGGAAGAAGAAGAAGAAGAAGAATCCATTTCTCCTCAACCACCAAGATTCATGAGTGTTATTCAAGAATTGCATAGGGCTAATTGGGGACTTGTTGAGGTGTTATGGTGTCATTTGAAGGAATACCTTGTGGACAAAGATGATCAAATTCCGATTCCAATGACACTGGTGAATGACCATAATTTTCTTATCAATGCGCTTCCGCCGAAAGCAGTCGACGACCTCCATGAAAAGGTTAAGCTGATGATGGATTCCGGGTTCAAGAATGAATGCTCGAACCAGTATAATAGCTGGAGAAGGGAGTTCTTYGAWATGTGTCTATCAATGTTGCGGTTAAAGGTTARCAACAAGATTGAAGGYGTTGACGAGAGAGAGAGGATTAGGAGCGATGTCGTAACTACCTTGCAAAAGCTCGCTAATGATTTTGTAACGGAGAGGCGTTCTTCGTTGACTCGTTTACCGAGCATGGTGAAGGTGGTTGGTACACTGCAGGATCTCATTCCAGAGCTTGATGATTCAGTGTTTMCTGCTCAACGCAGTGAAGCAGTCTCCATCATGGAGTTGGAGACATTAGAGGAAGCAACCAAGGATTATTATTGTACAAATATAGAGAATCTAATCTAA 1200 0.4108 MKLIEIRRWLTQPHVWRFVGLGSSVVGLFCYAVSSSFNNLFGEWTFLKIFFYTQLSLIICIAIFYAKVWQSSRSLRFKGNMALLVLTITSAYSFFLDSKAVKKKPDAFSLISCLAFSIMSLCLSRQIPCGFEVDLMYFFLGALIVQLMKIKLWLGILGVGFSYTLNILRSSLDENLHEGAGLQEDQRNVVIQVEEEEEEESISPQPPRFMSVIQELHRANWGLVEVLWCHLKEYLVDKDDQIPIPMTLVNDHNFLINALPPKAVDDLHEKVKLMMDSGFKNECSNQYNSWRREFFXMCLSMLRLKVXNKIEGVDERERIRSDVVTTLQKLANDFVTERRSSLTRLPSMVKVVGTLQDLIPELDDSVFXAQRSEAVSIMELETLEEATKDYYCTNIENLI* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0801 399 PANTHER PROTEIN, PUTATIVE-RELATED 7 310 - -
Amo17g0801 399 Gene3D Exocyst complex component Exo70 228 397 - -
Amo17g0801 399 PANTHER EXOCYST COMPLEX PROTEIN EXO70 7 310 IPR004140 GO:0000145|GO:0006887
Amo17g0801 399 SUPERFAMILY Cullin repeat-like 208 377 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0801 Amo-Chr17 18905858 18907310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0801 239 399 EXO70 exocyst subunit family AT5G58430 30.841 1.25e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0801 - - ahf:112702741 748.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0801 17 18905858 18907310 Amo07g1048 07 19670544 19671132 hybridization