Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0798 GCATTAGTCTTCTGCGAAATTTCCAATGAGAAAAGGAAGAGAAATTCTGATCCTGGGCTACAAAAAAAGCCTAACTGTGTAACAGCACTGATCACAACTCAAGATGGCGTCCTTGGTCTTCAAGATTCAGAGGTGGCTGAAGCAGCCAAAGCTGCCAAGGGGAAGCCGGATGCATATGGTCTGGTTTCTTGTGCTGCGTTTGCAGTGATGTCACTCAGTTTGTCAAGACGCACTCGCTGCGGATTTGAAGTGGACATGCTATATTTCTTTTTGGGAGCTCTGATAGTACAACTCATGAAGATAAAATGGGTGTTGGGTATAGCTGGAGCAGGTTTCAGTTATTTCCTAATCGTTCTCTTTTCTTGGTTAGATGATCCACAACCTGAAGAAAATGGATATATTGAACTCCAAGATCAGCCTCAAGTGATCATTCAGGTAGGTTCACTACAACCACGAGAATCCAATGCTAGCAGTGGTAGTGCTCCTGTTTCCACACAACCAGAGGCCAATATTCAAGATCAAGCAACCATTGATGGGGATTCACATTCGCAAAAAGCCAATGCTGATTTTGCTCTTATAAAGCCACATCTGTTGGTTTCTTTAAAAGCACTTAAGAAACAGAACCAGAAAATTTTTGGCTTGCTTTACGGCCAGTCTTTGGTAGATTCCATTCAGCATGACCACAACTTGTTTACTGACGTGATTCCATTGAAAATTATCAATCGCCTTAATGGAGCTGTTAAAATTGCGGCTGCCAATGGGTTTGAGAAGGAGTGGTGCCAGTTATACAGCAGTTGTCGCAGAGAGTTCTTGCACCAGTGCCTTTCCAAGTTAGAGTTGGAAGACTTAAACAACATAGACAAGAACACATTGGACAGGATTTCAAGTTGGAGAGAAGGTTTTCGTATTGCAATCCACAAATTGTTTCCTGCCGAAAGGAGACTTTGCAATCGTGTTTTCTTTGGATTCTCCTCCCTTGAAGATCTGACTTTCATGTTGATTTGCAAAGAACTCACCGTTTATTTCCTAAACTTTGCAAATACTGTTGCAAATACTACTCCATTTGAAAACAGTTGGAGAAGTACTTTAGCAAGCCAAGTGGAAATGTTTAGGGGCATGTGTGACATGATACCTGGATTGGAATCGGTGTTCCCTGATCAGCACAGTGCGCTACTAAAAATTGAAGCAATGATGACTCGACAAAGATTGGGTGAGAAGATTAGGGATGTTTTCAAAGACATGGAGAATCTGATTTGCTGTGATTCAGCTATTGTGGATGTTGTAGGTGACGTTGATGTGCTTACCTACAACATCATGTATGGTCTTAGTGTAGCATTGAGAAATTGGGATATAATTGAGAAGGCTCTCATAGAGTATCCCATGGGCATTAATAAAGGGGGATCTTATCCTTCACTTTCTTCCCAGATAGCTCGGATAGTGGAGTTGCTGGATAACCACTTAGAAGCCAAATGCAAAACCTACACTGATCCTGCTTTGGGACATGTTGCCATGTTGAATAATGTCACGTTCATCACACAAAGGGTACTGCATCATCCTTCCATAGCCCGATTTCGGAGCGATAACTACAGTTCCGCTAACATTTGGGATGAAGATTGGATGAAAAAGTGCACAGCGAAAATTCGGCAAAACCTTGAAGATTATAAAAGAAGTTCATGGAATGAGGTGCTGGGCTTATTGAAGCTGGATAACAATGAATCACTGGAAAATAATGTAGCAGCTGAGTCCATGAAAGAGAAGCTAAAGTTGTTCAACGTTCAATTTGAGGAGATATGCTGCACTCAGTCTAAATGGTTTGCTAGGGATGATATACGGAAAGAGATAATAGTATCCGTAGAAAACATTTTGTTACCAGCATATGGAAGCTTCGTTGGAAGGCTCCAGGATGTTCTCGGTAAGGCTGCTTATGACTATATACAGTATGGAATGCTTGACATTCAAGATCGACTCAACCGCCTTTTTCTTGGAGACAAGCGGATGAGTCGGTAG 2007 0.418 ALVFCEISNEKRKRNSDPGLQKKPNCVTALITTQDGVLGLQDSEVAEAAKAAKGKPDAYGLVSCAAFAVMSLSLSRRTRCGFEVDMLYFFLGALIVQLMKIKWVLGIAGAGFSYFLIVLFSWLDDPQPEENGYIELQDQPQVIIQVGSLQPRESNASSGSAPVSTQPEANIQDQATIDGDSHSQKANADFALIKPHLLVSLKALKKQNQKIFGLLYGQSLVDSIQHDHNLFTDVIPLKIINRLNGAVKIAAANGFEKEWCQLYSSCRREFLHQCLSKLELEDLNNIDKNTLDRISSWREGFRIAIHKLFPAERRLCNRVFFGFSSLEDLTFMLICKELTVYFLNFANTVANTTPFENSWRSTLASQVEMFRGMCDMIPGLESVFPDQHSALLKIEAMMTRQRLGEKIRDVFKDMENLICCDSAIVDVVGDVDVLTYNIMYGLSVALRNWDIIEKALIEYPMGINKGGSYPSLSSQIARIVELLDNHLEAKCKTYTDPALGHVAMLNNVTFITQRVLHHPSIARFRSDNYSSANIWDEDWMKKCTAKIRQNLEDYKRSSWNEVLGLLKLDNNESLENNVAAESMKEKLKLFNVQFEEICCTQSKWFARDDIRKEIIVSVENILLPAYGSFVGRLQDVLGKAAYDYIQYGMLDIQDRLNRLFLGDKRMSR* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0798 668 SUPERFAMILY Cullin repeat-like 221 660 IPR016159 -
Amo17g0798 668 Pfam Exo70 exocyst complex subunit 296 657 IPR046364 GO:0000145|GO:0005546|GO:0006887
Amo17g0798 668 PANTHER PROTEIN, PUTATIVE-RELATED 44 662 - -
Amo17g0798 668 Gene3D Exocyst complex component Exo70 174 668 - -
Amo17g0798 668 PANTHER EXOCYST COMPLEX PROTEIN EXO70 44 662 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0798 Amo-Chr17 18837330 18839619 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0798 227 662 EXO70 exocyst subunit family AT5G58430 39.286 7.32e-92 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0798 - - aip:107607041 1241.48