Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0793 ATGCCTACTGCTTCTTCCTTGCCAGACCAATTAAAAGATTGGATGCTGCATAGGTCACATGAATGGTGGTTAGTGAGTAGTGTCCTGTCAGCTTCGGTTGGACTCATCTGTTTTGCTGTCAGCTTCTTCAACCATCATCTTAAAGAATGGAATCTGTTGCTTAAATTCTCCATCATCTCCGTTGCTTGCATTGCCCTCATCTGTATTGCAGTTTTAATTGCAAAAAAAATGCTAGAGGGGAGCAATCCTTGGGTTAAAGCACATTTGGTATTTTTCGCCATTATAGTCACATATATCCTCACCTTCTTTCTTGATAAAGAAAAAGAGGAGGAACCGGATGTATATGGCCTGGTATCCTATGCTGCATTTGCTGTGCTGTTTTTAAGTCTAGCAATACAGACTCGACTCGGTTTTTTGGGAGAAATCGTATACTTTTTTCTTGGAGTTCTACTTATCCGACTCATGGAGATAAAATGGTGGTTGGTTTTCCCTGGAGCATGCTTCAGTTATCCACTCATCATTCTTTCTTCATTTCTAGATGAACTATCAGGAGAACGCGGTCGCCTCCCCATTCGAACGCCTCTACCAGCTTCACCCGATGCTGAAACTTCTCATGTTGATGATACCGGCGCTCTAATGAGTCCACAACAATCCAATAATACCGATACCGATACTGTTCCTCTTTTGGCGCCTCAACCACCAGTTCGGCGTGATGATCTCTTAGACGTGTTCAGGCATGCTCTACGCCCGCTTAATGGGATGGATAGGGAAGTTGCAAGGGAGTTACAGCGCCCCTTGAAGGATTACATCACGGATAGAAGTGAAGAGGTTCCAGAGGTATTGGTGAATGACCCCAACTTCCTAGTGGATAGGATTTCGCCACAGGTACTTGATGAGCTGAATCGCTTGATGAAGAATTCGCCCCAGTTTGAAGAGCACATTAAGAATTTGGTGGTGGATGAATACAGCAGAAGTCGGAAACGGTTCTTGGAGATATGCCAGGTGGAGTTACAGTTGAATGTGCAACAAACATGGAATGACATCCACGATGGAAGCGAAAGGCACAGGATCCAGAGGTGGATTAAACTTTCCACCATAGCATTGAGGATGCTATTTCCTTATGAACGGAGACTCTGCCAGCGAATCTTTGGCTCCCACTCTGAAATCTCGGATAAGTGTTTCATGCAGGTTTGCTCGGAATTGGCACAAGATTTACTGAATTTCACGGATCATATTGCAAATAGGAGGAATTTTGAACAGATGAGCTATTCGCACTCCATTTTCCAAGTGTTCAGAACACTAAACCTAAGTATTCCAGCCTTTGAGTCACTGTTTTCTAATTCTCACTTCGGCTCTTCACTCTGGATTGAAGCAGCGCGCGTTAAAGAAAGACTGTGTAGAGTAATTAAGGATTACTTTTTCACGGAGTTGGAGGAATTGGCTCACGCAGATGGAAGAGTGTCTTCGCTTTCTACTCACATTGCTTGGATGATCGAGCTGCTAGAGACCAATTTGGAAGCCTTCACAAAAAAATTTAAGAATGCTTCCGTGGGCAGTATTTACTTAATCGATAATGTTAATTACATAGTAAAGAAAGTCTGTGGTACTCAATTGAACACCATTTTGGGGGGTACTTGGCTAGAAGAACAAAGTGCCAAAATCGATCAGTACATCAAGGACTATCAAAGAATCTCATGGGATAACGTGTTGGGCTTCTTGAAGTTGGACAGCGATAATGTGACGGCAGAGTCAATGAAAGAGAAGCTCCGGTCGTTCAACGAGCAATTTCCAAAAACGTTGGTTGAACAGCGTCATTCGTCACTCGATGATCAGAAGCTACGGGAAGATATAATAGAATCGGTGCGCTTGGTCTTAGTCCCAGCATATGGAAATTTCATCAACAAGTTTCGCGATATTCTTCTTGATCATGCTGATGAGTACATCGAGTATTCAACGTCGGAAGTTGAAAGCCGCCTCAGGGGCACGTTGGACGGCTCGTTTTTTGCATTTTTCTGA 2016 0.435 MPTASSLPDQLKDWMLHRSHEWWLVSSVLSASVGLICFAVSFFNHHLKEWNLLLKFSIISVACIALICIAVLIAKKMLEGSNPWVKAHLVFFAIIVTYILTFFLDKEKEEEPDVYGLVSYAAFAVLFLSLAIQTRLGFLGEIVYFFLGVLLIRLMEIKWWLVFPGACFSYPLIILSSFLDELSGERGRLPIRTPLPASPDAETSHVDDTGALMSPQQSNNTDTDTVPLLAPQPPVRRDDLLDVFRHALRPLNGMDREVARELQRPLKDYITDRSEEVPEVLVNDPNFLVDRISPQVLDELNRLMKNSPQFEEHIKNLVVDEYSRSRKRFLEICQVELQLNVQQTWNDIHDGSERHRIQRWIKLSTIALRMLFPYERRLCQRIFGSHSEISDKCFMQVCSELAQDLLNFTDHIANRRNFEQMSYSHSIFQVFRTLNLSIPAFESLFSNSHFGSSLWIEAARVKERLCRVIKDYFFTELEELAHADGRVSSLSTHIAWMIELLETNLEAFTKKFKNASVGSIYLIDNVNYIVKKVCGTQLNTILGGTWLEEQSAKIDQYIKDYQRISWDNVLGFLKLDSDNVTAESMKEKLRSFNEQFPKTLVEQRHSSLDDQKLREDIIESVRLVLVPAYGNFINKFRDILLDHADEYIEYSTSEVESRLRGTLDGSFFAFF* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0793 671 Pfam Exo70 exocyst complex subunit 484 659 IPR046364 GO:0000145|GO:0005546|GO:0006887
Amo17g0793 671 Pfam Exo70 exocyst complex subunit 358 472 IPR046364 GO:0000145|GO:0005546|GO:0006887
Amo17g0793 671 PANTHER EXOCYST COMPLEX PROTEIN EXO70 30 659 IPR004140 GO:0000145|GO:0006887
Amo17g0793 671 PANTHER PROTEIN, PUTATIVE-RELATED 30 659 - -
Amo17g0793 671 MobiDBLite consensus disorder prediction 209 227 - -
Amo17g0793 671 Gene3D Exocyst complex component Exo70 240 486 - -
Amo17g0793 671 MobiDBLite consensus disorder prediction 191 231 - -
Amo17g0793 671 Gene3D Exocyst complex component Exo70 547 662 - -
Amo17g0793 671 SUPERFAMILY Cullin repeat-like 260 659 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0793 Amo-Chr17 18745251 18747398 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0793 282 665 EXO70 exocyst subunit family AT5G58430 31.250 3.05e-53 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0793 - - aip:107606911 947.192