Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0776 ATGAAGCCAAAAAGTAGAGTCTCTTCATCAGGTATAGCTTTCCCGCCATTCACCAAATCAAGAGTGAAATTATGTTGTTTTAAGGATTTGATTAACTTGTTGGATGTAACACCCTCACTATCAGAAAGAATATTGGGGCCGAATGTCTGTCGTTTTGTAGTCCAATGGCATCAAATTCAAATGAGGCACAACGACCACTTCATTTCAACTTCGTTTATTAAAGATAAAGCAATGGCAAGCATGATGAAGGAGTCCACAGAGCAAATGATGGAGAGGTGGATCACCCAAATTAATTCCGGCAACCGCAAAATCGACGTCGAGAAAGAAATCATAGCGACGGCAGGAGAGATCATAGCAACAACAAGCTTTGGCATGAAAGACCAAAAAGCAAGAGAAATATGTGAAAAGTTAAGAGAATTACAAATGATACTTTTCAAGACAACAAGATATGTTGGTGTCCCATTTGGCAAATGGTTCAACACAAAGAAAACCCTAGAAGCATGGAAACTAGGGAAGGAGATTGACAAGCTCTTGTTGCATGTCATAACTAACCGAAAGGATTCAAAAAACAAAGAAAAGGATCAAAAAGAAGATTTACTAGGGTTGTTGCTTGAAGCTAATAGAAAAGTTGATGGGAAATTAGGGAAGACATTGAGCACAAGACAACTTGTGGATGAGTGCAAGACTTTCTTCTTTGCTGGCCATGAAACAACAGCATTGGCTATTTCTTGGACTTTGTTTTTATTAGCTGTTCATGAAGATTGGCAAATCCAATTAAGAGATGAGATTAGAGAAGTGGTGGGTGATAATAGAGAGATTGACACTAATGCCCTTTCTGGCTTGAAAAAGATGAAGTGGGTAATGAATGAAGCTGTGAGGCTTTATCCACCAGCACCAAATGTTCAAAGGCAAGTAAGAGAGGACATTAAAGTTGATAATAATTTCACAGTGCCAAGTGGTACCAACATATGGATTGATGTTGTGGGAATGCATCATGATCCAACTCTATGGGGAGATGATGTGAATGAGTTTAGGCCAGAGAGGTTCATGGATGATGTCAATGGTGGATGCAACCACAAGATGGGGTACTTGCCATTTGGATTTGGAGGGAGAATGTGTGTTGGTAGGAGCTTGTCATTCATGGAGTATAAGATTGTGTTAACCCTACTTCTCTCTAGGTTTAGCTTCAAACTCTCACCAACTTATCAACATCAACCTTCTATCATGCTCTCCCTTAGGCCCACTCATGGAATTCCTCTCATAGTTGAAACCCTAATTTAG 1281 0.3966 MKPKSRVSSSGIAFPPFTKSRVKLCCFKDLINLLDVTPSLSERILGPNVCRFVVQWHQIQMRHNDHFISTSFIKDKAMASMMKESTEQMMERWITQINSGNRKIDVEKEIIATAGEIIATTSFGMKDQKAREICEKLRELQMILFKTTRYVGVPFGKWFNTKKTLEAWKLGKEIDKLLLHVITNRKDSKNKEKDQKEDLLGLLLEANRKVDGKLGKTLSTRQLVDECKTFFFAGHETTALAISWTLFLLAVHEDWQIQLRDEIREVVGDNREIDTNALSGLKKMKWVMNEAVRLYPPAPNVQRQVREDIKVDNNFTVPSGTNIWIDVVGMHHDPTLWGDDVNEFRPERFMDDVNGGCNHKMGYLPFGFGGRMCVGRSLSFMEYKIVLTLLLSRFSFKLSPTYQHQPSIMLSLRPTHGIPLIVETLI* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0776 426 PRINTS P450 superfamily signature 286 297 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0776 426 PRINTS P450 superfamily signature 364 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0776 426 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0776 426 PRINTS P450 superfamily signature 233 250 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0776 426 PANTHER CYTOCHROME P450 FAMILY 72 PROTEIN 65 420 - -
Amo17g0776 426 PANTHER CYTOCHROME P450 FAMILY MEMBER 65 420 - -
Amo17g0776 426 Gene3D Cytochrome P450 42 424 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0776 426 Pfam Cytochrome P450 56 410 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0776 426 PRINTS E-class P450 group I signature 222 239 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0776 426 PRINTS E-class P450 group I signature 327 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0776 426 PRINTS E-class P450 group I signature 363 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0776 426 PRINTS E-class P450 group I signature 373 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0776 426 PRINTS E-class P450 group I signature 242 268 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0776 426 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 366 375 IPR017972 GO:0005506|GO:0016705
Amo17g0776 426 SUPERFAMILY Cytochrome P450 61 422 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0776 Amo-Chr17 18219355 18225454 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0776 62 425 Cytochrome P450 AT5G52400 57.650 7.44e-151 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0776 - - gmx:100784128 543.117