Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0768 AGAAACATAATGGAATTCCAAAGTGAAATGCAGGCAGCAAAACTGCTTAAAGCTCAAAGCCACATATGGAATCACATATTCAATTTCATAAACTCTATGTCTCTTAAATGTGCTGTTGAATTAGGCATACCTGATGCCATTCACAATTATGGTCAACCCATGCCACTTTCACAACTCATAGCTTCACTTCCAATCCACCCATCAAAATCCTCCTCCATCCAACGTTTGATGAGAATCTTAATCCATTCCGGCTTCTTTGGAACGAAGAATGTCGCCAACGATGACGCGGAAGTTGGGTATGTGTTAACTGATTCATCCATGCTTCTGCTTAAGGACAACCCCTTAAGTGTGACACCGTTCTTACTTGTCATGCTTGATCCAATGTTAACAAAACCATGGCATAAATTGTCCACATGGTTCCAAAGTAACAATCCCATACCATTTGAAACAGAACATGGGGAAGTGTTTTGGGCATACGCTTGTCATGAGCCTAAATTCAATGAAATTTTCAATGATGCCATGGCAAGTGATGCTCGATTGGTTAGCAAGTTGTTACTTGATGACAAGTGCAAGGGTGTGTTTGAGGGTTTGGAATCGTTGGTTGATGTTGGTGGAGGCACTGGAATTTTCGCCAAGGCCATAGCCAAATCATTCCCACAGTTAGATTGCACTGTATTTGACCTCCCACATGTTGTTGCTGACTTGGAAGGAAGTGACAACCTTAAATATATTGGAGGGGACATGCTTGAGGCTATTCCTCCCTCTAATGCCATTTTGTTGAAGTGGATTTTGCATGACTGGAATGACGAAGAATGTTTGAACATATTGAAAAATTGCAAGGAAGCAATCACGAGCAAAGGCAAAGGAGGAAAGGTTATTATCATAGACATGATAATAATGGAAGATGAGAAAAAAGGTGGTGGTGATGATAAATCTGTTGAAACACAACTCTTCTTTGACATGCTGATGATGGTGTTGCAGACTGGAAAGGAGAGAGATGAAAAAGAATGGGCCAAATTAATAGTTTCTGCTGGATTTAGTAACTATAAAATAACTCCAATTCTATGA 1068 0.4007 RNIMEFQSEMQAAKLLKAQSHIWNHIFNFINSMSLKCAVELGIPDAIHNYGQPMPLSQLIASLPIHPSKSSSIQRLMRILIHSGFFGTKNVANDDAEVGYVLTDSSMLLLKDNPLSVTPFLLVMLDPMLTKPWHKLSTWFQSNNPIPFETEHGEVFWAYACHEPKFNEIFNDAMASDARLVSKLLLDDKCKGVFEGLESLVDVGGGTGIFAKAIAKSFPQLDCTVFDLPHVVADLEGSDNLKYIGGDMLEAIPPSNAILLKWILHDWNDEECLNILKNCKEAITSKGKGGKVIIIDMIIMEDEKKGGGDDKSVETQLFFDMLMMVLQTGKERDEKEWAKLIVSAGFSNYKITPIL* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0768 355 Gene3D - 5 109 IPR036388 -
Amo17g0768 355 PIRSF O-mtase 2 355 IPR016461 GO:0008168
Amo17g0768 355 Gene3D Vaccinia Virus protein VP39 110 355 IPR029063 -
Amo17g0768 355 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 23 355 IPR016461 GO:0008168
Amo17g0768 355 PANTHER O-METHYLTRANSFERASE 10 354 IPR016461 GO:0008168
Amo17g0768 355 PANTHER O-METHYLTRANSFERASE 10 354 - -
Amo17g0768 355 Pfam O-methyltransferase domain 133 347 IPR001077 GO:0008171
Amo17g0768 355 Pfam Dimerisation domain 33 80 IPR012967 GO:0046983
Amo17g0768 355 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 354 IPR029063 -
Amo17g0768 355 SUPERFAMILY "Winged helix" DNA-binding domain 13 114 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0768 Amo-Chr17 17984115 17986742 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0768 33 351 Monolignol Biosynthesis Gene Families AT5G54160 33.742 1.84e-51 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0768 - K16040 aip:107609507 538.88