Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0758 ATGGAATTCCAAAGTAGAGAACAGGGGGATAATGGTAAACTTCTTAAAGCCCAAAGTCACATATGGAATCATACTTTTAATTTTATAAACTCTATGTCTCTTAAATGTGTTGTTGAGTTAGGCATACCTGATGCTATTCACAAATATGGCAAACCTATGCCACTTTCACAACTCATTTCTTCATTGCAAATTCATCCATCAAAAACCTCCTTTGTCCATCGATTGATGAGAATCTTGGTCCATTCCAACTTCTTCACTACCAAGAATGTCACCAGCAATGACCTCGAAGTTGAAGTTGGGTATGTTCTAACCGATTCATCTATGCTATTGCTTAAGGACAACCCCTTAAGTTTGATACCTCACTTGTTTATGGCCCTAGATCCCAATATTATAAAACCATGGCATCAGATGTCCACATGGTTTAAAAATGATGATCCTACATCATTTGAAACGGAATATGGGATAACGTTTTGGGATTATGCTAGGCAAGCTCCTAAATTTAATGAACTTTTCAACGATGCCATGGCAAGTGATGCACGATTAGTTAGCAAGTTTTTACTTGATGACAAGTGCAAGGGAGTGTTTGAAGGTTTGGAATCATTGGTTGATGTTGGTGGAGGCACCGGAACTGTTGCAAAGGCCATTGCCAAAGCATTTCCACAGTTAGAGTGCATTGTTTTGGATCTTCCACATGTTGTTGCTGATTTGGAAGGAAATGAGAACCTTAAATATGTTGGAGGAAACATGTTTGAGGCCATTCCTCCTTCTAATGCCATTTTGTTGAAGTGGATTTTGCATGACTGGAATGACGAGGAATGTTCGAAAATACTGAGGAACTGCAAAGAGGCACTACACATGAGCAAAGGCGAAGGAAGGAAGATTATTGTTATAGACATCGTGATGGGGGATGAGAAGAGTGATCATGAGTCAATTGAAACACAACTCTTCTTTGACATGTTGATGATGGTGTTCCTAACAGGAAAGCAGAGAAATAAAGAAGAATGGGCCAACTTAATATTCTCAGCTGGTTTTAGCGACTACAAAATAATTTCAATTTTAGGAATAAGGTCTCTTATTGAGATATATCCATAG 1092 0.3846 MEFQSREQGDNGKLLKAQSHIWNHTFNFINSMSLKCVVELGIPDAIHKYGKPMPLSQLISSLQIHPSKTSFVHRLMRILVHSNFFTTKNVTSNDLEVEVGYVLTDSSMLLLKDNPLSLIPHLFMALDPNIIKPWHQMSTWFKNDDPTSFETEYGITFWDYARQAPKFNELFNDAMASDARLVSKFLLDDKCKGVFEGLESLVDVGGGTGTVAKAIAKAFPQLECIVLDLPHVVADLEGNENLKYVGGNMFEAIPPSNAILLKWILHDWNDEECSKILRNCKEALHMSKGEGRKIIVIDIVMGDEKSDHESIETQLFFDMLMMVFLTGKQRNKEEWANLIFSAGFSDYKIISILGIRSLIEIYP* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0758 363 SUPERFAMILY "Winged helix" DNA-binding domain 13 115 IPR036390 -
Amo17g0758 363 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 361 IPR029063 -
Amo17g0758 363 Pfam O-methyltransferase domain 134 345 IPR001077 GO:0008171
Amo17g0758 363 Pfam Dimerisation domain 32 80 IPR012967 GO:0046983
Amo17g0758 363 PIRSF O-mtase 1 363 IPR016461 GO:0008168
Amo17g0758 363 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 363 IPR016461 GO:0008168
Amo17g0758 363 PANTHER O-METHYLTRANSFERASE 12 363 - -
Amo17g0758 363 Gene3D - 4 110 IPR036388 -
Amo17g0758 363 Gene3D Vaccinia Virus protein VP39 111 363 IPR029063 -
Amo17g0758 363 PANTHER O-METHYLTRANSFERASE 12 363 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0758 Amo-Chr17 17716800 17719442 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0758 32 361 Monolignol Biosynthesis Gene Families AT5G54160 31.832 1.93e-50 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0758 - K16040 aip:107609507 533.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0758 17 17716800 17719442 Amo17g0758 17 17716800 17719442 ECH
Amo17g0758 17 17716800 17719442 Amo07g0828 07 13284137 13286689 hybridization