Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0755 ATGTTATTGATCTATCTAGATAGCATTTCATATAGAAACATCATGGAACTCCAAAGTGAAATGCAAGCAGCTAAACTTCTTAAAGCTCAAAGCCACATTTGGAATCATATATTCAATTTCATAAATTCTATGTCCCTTAAATGTGCTGTTGACTTAAGCATACCTGAAACCATTCATAATTATGGCCAACCCATGCCACTCTCAAAGCTTATTGCTTCATTGCAAATTCATCCATCAAAATCCTCCTTCATCCATCGCTTGATGAGAATCTTGATCCAATCGGGCTTCTTCGCTACCGAGAATATGGCCAACAATGAGCTCGAAATCGGGTATGTTCTAACGGATTCATCTATGTTGCTACTTAAGGACAACCCCTTGAGTGTGACGCCTTTTTTGCTTGCCATGCTTGATCCCATTTTCACAAAACCATGGCATCAATTGTCTACATGGTTCAGAAATGATGATGCTACACCATTTGAAACTGAAAATGGCATACCATTTTTCGAGTTTTTTGGCCGTGAGCCTAGACTTAATAATCTTTACAATGATGCGATGGCAAGTGATGCTAGATTGGTTTGCAATTTGTTACTTGATGACAAGTACAAGGGCGTGTTTGAGGGTTTGGAATCATTGGTTGACGTTGGTGGAGGCACTGGAACTCTTGCAAAGGCCATTGCCAAATCATTTCCCCAATTGGAGTGCATTGTATTCGATCAACCGCATGTTGTTGCTGGCTTCGAATTTGAAGGGACTGAGAACCTTAAATATGTTGGAGGAGACATGTTTGAGGCCATTCCTCCGTCTAATGCCATTTTGTTGAAGTGGATTTTGCATGACTGGAATGACGAGGAAGGTTTGAAGATATTGAGAAAATGTAAAGAGGCAATCATGAAAAATGGCAGCAAAGGAGGGAAGGTGATTATCATAGATATGGTGATGAAGGATGAGAAGAAAGGTGATGATGAATCACTTCAAACACAACTCTTCTTTGACATGCTGATGATGGTGTTGCATAATGGAAAGGAGAGAAATGAAAAAGAATGGGCCAAATTAATATTCTCTGCTGGTTTTAGTGACTACAAGATAATTCCAATTCTAGGAATAAGGTCTCTCATTGAGATATATCCATAG 1131 0.3926 MLLIYLDSISYRNIMELQSEMQAAKLLKAQSHIWNHIFNFINSMSLKCAVDLSIPETIHNYGQPMPLSKLIASLQIHPSKSSFIHRLMRILIQSGFFATENMANNELEIGYVLTDSSMLLLKDNPLSVTPFLLAMLDPIFTKPWHQLSTWFRNDDATPFETENGIPFFEFFGREPRLNNLYNDAMASDARLVCNLLLDDKYKGVFEGLESLVDVGGGTGTLAKAIAKSFPQLECIVFDQPHVVAGFEFEGTENLKYVGGDMFEAIPPSNAILLKWILHDWNDEEGLKILRKCKEAIMKNGSKGGKVIIIDMVMKDEKKGDDESLQTQLFFDMLMMVLHNGKERNEKEWAKLIFSAGFSDYKIIPILGIRSLIEIYP* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0755 376 SUPERFAMILY "Winged helix" DNA-binding domain 24 125 IPR036390 -
Amo17g0755 376 PANTHER O-METHYLTRANSFERASE 21 376 IPR016461 GO:0008168
Amo17g0755 376 Gene3D Vaccinia Virus protein VP39 121 376 IPR029063 -
Amo17g0755 376 Pfam O-methyltransferase domain 144 358 IPR001077 GO:0008171
Amo17g0755 376 PIRSF O-mtase 12 376 IPR016461 GO:0008168
Amo17g0755 376 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 125 374 IPR029063 -
Amo17g0755 376 Pfam Dimerisation domain 44 91 IPR012967 GO:0046983
Amo17g0755 376 Gene3D - 16 120 IPR036388 -
Amo17g0755 376 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 34 376 IPR016461 GO:0008168
Amo17g0755 376 PANTHER O-METHYLTRANSFERASE 21 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0755 Amo-Chr17 17627610 17629887 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0755 44 363 Monolignol Biosynthesis Gene Families AT5G54160 33.028 6.35e-51 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0755 - K16040 aip:107609507 759.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0755 17 17627610 17629887 Amo17g0755 17 17627610 17629887 ECH