Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0750 ATGCTTGCTGAGGGTTGTTGTGTTCCAAAAAATTATGCAGAAGAAGTGGAGTGTGTTAATTGTAATGTCAATGAATTTTTTGGTGACACCTTCTATGACAACTGGGATGAAAGGGCAGTTGATAGTATTGATGAGTTCAGGTATATAAATCTGAAAGAAATAACTGCAAGTGAGACGAACGGTTTTGTTGTTAGAAAGAATAGGATTAGAAGGAATGTCAAAAATGAGGTAACACAACAACAATTTGTTTGCTTTAGGGAGGGGTTTAGAGATCCGGGGTTTGAGAATGACTCCCATCAATGCAAACGCGCGCTGAAGCCTGAGACTAGATGTGGATGTCTGGCCAAAATATGTGTTCATTTGGGATATAAACACCTCAGATATATTCATCGTTTGTGCACACTGCGGGTGGATTCCAAAATGTATCCTTTTGAGGAGAGATATTTCTTGCGATGCATATGTCAAATGAGGTCAAGGGAAGCACAAAGTGAGTTAGCATCTGTTGTTAGAGATTTAGTGTTGAAGAGTCTACTACATGCATTGGAAAGATTTACTGCCAACACACTGACAAGAGAGATTTTCATGTTATTCAAGCCAATGTTGTCAAGAGCTTGTATGTTGAAGGTTCGTTCATGTACATTGACACCAAGTTATGAGATTTCTACAATGTCCATGTCGAAAAATCCTAACAAAGAATGGAACGTGTCTCACTATCGAGACAGATCAATTTTTAAGTGCTCCTGCTTCAGGATGGAATTGCTTGGCATACCTTGTGATCGTATCGTGAGCAGTTCTAGTACATCTTGA 807 0.3916 MLAEGCCVPKNYAEEVECVNCNVNEFFGDTFYDNWDERAVDSIDEFRYINLKEITASETNGFVVRKNRIRRNVKNEVTQQQFVCFREGFRDPGFENDSHQCKRALKPETRCGCLAKICVHLGYKHLRYIHRLCTLRVDSKMYPFEERYFLRCICQMRSREAQSELASVVRDLVLKSLLHALERFTANTLTREIFMLFKPMLSRACMLKVRSCTLTPSYEISTMSMSKNPNKEWNVSHYRDRSIFKCSCFRMELLGIPCDRIVSSSSTS* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0750 268 Pfam FAR1 DNA-binding domain 58 123 IPR004330 -
Amo17g0750 268 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 59 149 - -
Amo17g0750 268 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 59 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0750 Amo-Chr17 17415570 17417344 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo17g0750 FAR1 7.6e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0750 - K17604 adu:107464713 191.045