Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0745 ATAAATGAATCAACTTTAAATCAGTTGAATGAGTGCGATTTGGATAATTCTTCCGAAACGCATCAATTTGATGAGACCAGTTGTGTTGTGGATGAAAAATTTGTCCCAAAGGTGGGAATGATTTTCAAGACACTAGAAGAAGCTGGAAAGTTCTACAAACATTATTCCAAACTTGCCGGTTTTTCTACGAAAATAAGGAACACGACTCGGGATAGAGACAAGATTAAGAATAAACTAATTGTATGCACCAGAGAGGGGAGGTGGAAATCTAAGATATCTCCAACTTTGAAGACAAACCCTTCAGCTGGGTTAAATTGTCCAGCCAGAATTTACGTACACATAATGAAGGATGTTGGTTTTTGGACAATTTTCAAGGTTGTTTTGAATCACTCACATCCTTGTTGTCCAGACCGGCTGAGATGCTCAAACAACACAGGGAGCTTAGCATGTTTGTGCCTGTACGAGGATCGGCATATATGGATTCCAGTTTACTTGGATCACCACTTCTGGGTCGGGATGAGAAGCACACAAAGGAGCGAGAGCATGCATTCATTTTTCAACAAGTTCATCACACGGAATAGCTCCTTGAGACAATTCCAAGCAGAGAGAGAATTTGATGCTGCAGATTTTCACACCGTGATACCGTGCGCAACAAAATCAGCAATAGAGGCACAGTTTCAGCATGTATATACCCATGAGAAGTTCAGGGAAGTTCAAGCTCAATTCAGAGGTAAAGTGAACTGTATCACAAGATCAATGCATTCCACCCTAGGTTTCACAACATATGAAGTCATTGAGCAGGTTTCCAACTCCACATTCAACAAGGGCATATTGTGCCGCCATTCCCTAAGCGTCCTAAGCTTTGAGCGAGTGGATAACGTGGCACCGAAATACATATTGAAACGCTGGAGCAAGAACATAAAGAGGAGGCATACACACATCAAGAGCAGCCAAGACGAGCCTCTACTGGAGCCAAGAAGTAAGAGATTTGACGAATTGGTGTTTCGGTCGCACAATATATGTGAATTTGCATCCGAGTCTGAAGAGTTGACCGGAATTCTGCACCGAGCATTTGACAAGACTCCGGATCATCGATTCAGTCAAGCTCCACTCTTTACAATGCACCAGATATGA 1134 0.4242 INESTLNQLNECDLDNSSETHQFDETSCVVDEKFVPKVGMIFKTLEEAGKFYKHYSKLAGFSTKIRNTTRDRDKIKNKLIVCTREGRWKSKISPTLKTNPSAGLNCPARIYVHIMKDVGFWTIFKVVLNHSHPCCPDRLRCSNNTGSLACLCLYEDRHIWIPVYLDHHFWVGMRSTQRSESMHSFFNKFITRNSSLRQFQAEREFDAADFHTVIPCATKSAIEAQFQHVYTHEKFREVQAQFRGKVNCITRSMHSTLGFTTYEVIEQVSNSTFNKGILCRHSLSVLSFERVDNVAPKYILKRWSKNIKRRHTHIKSSQDEPLLEPRSKRFDELVFRSHNICEFASESEELTGILHRAFDKTPDHRFSQAPLFTMHQI* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0745 377 PANTHER OS03G0843700 PROTEIN 19 140 - -
Amo17g0745 377 PANTHER OS03G0843700 PROTEIN 152 323 - -
Amo17g0745 377 Pfam FAR1 DNA-binding domain 50 135 IPR004330 -
Amo17g0745 377 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 19 140 IPR031052 GO:0006355
Amo17g0745 377 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 152 323 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0745 Amo-Chr17 17341814 17344644 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo17g0745 FAR1 1.5e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0745 - - adu:107484182 366.311