Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0743 ATGGATGAATTTAGCAGTGGTGATCAAGCTCCTGAGTGGACCAGTAGCAGCAGTGACGATAGCATTTACTATGAGGATGAAGATTCTCATCAAGGTGTTGAGAACACTGATAATATTGAATCTAGCATAGAGAAAGATGATGACAAGGTTACTACAACTATGCTATGGAGTTCTGAGTTTGACGAGGAGGTTCATGCCTATAAAGCTTATATAAAGTATGCGAGAGATATGGGTTTTGTTGTCCGTAAAAGAGACTTGTCAAGAGATGAGGATGTGAATTTGAATAGAAGATACTATGTTTGCAATTGCCAAGGGACAAGGGATCCAAAACACTATCGTCTAGTTGATAGAAAGAGGAATCATAAGCCAGAGACAAGAATTGGTTGCAAGGCACATTGTTCTGTTTATTTGGATAAGTTGTCCATGAAATGGAGAGTTAAGACACTAGAAGAGGAGCACAACCATCCAATGATCCCAGAACAATTTGTTCATTTAATTTCTAGCTATCGGAAGTTGACTGAGGCTGACAAAGTCCGGATTGTTTGCATGAAGGAACCTGGGTTTCAAACTTCTCAAATTGTTGGGGTTTTGGCGAAGCTTGCTGAGCGTGTGGTTAAAGAGTACCGTAACAATGAATTTGTTGCTCAATTCAAGTCTATGTATAGTAAGCCAGTGCTGACTACTGGGTTGGACTCCATTGAGCAGGCTGCAGCAAGGGTTTACACTACAGAAGTATTTGTAGAGGTGAAGGATCAACTAGCAAAAGTTGCTGCACTAAAGCATGTTGGCAAAAGTGGTATGGGCAGTAATGTTGTTCATTGTGTTGCAAATTTAGACGACCAGAGATGGCGAAAAGATGCAAAGGCGTACTTAAATGAAGAAGTTGATGATGGAAAAGACCCGAAGAGAGCGTTTTCTCTCCGCGTTTGCTCTCCGGGTGCGCCAAAACTCAACAAGAAATTCAAGGGATTGAAGACAAGGAACTGCTCCCGTTGTGGGAAAACTGGTCACACCCGAAGAACATGTCATAATGTAGAATCTAAGAAGCAATGTTCGACTGGAGACAATGGCTCTGAAGGCCAAGGGCATGGCAGTAGGTTTGAGACAGGACGGCATAATAGTCATGATGATGATGTCGTGGCCAAGCAAGGATCACTTTCAAGCAAGTTTGGTTTGTATAGCACAGAAGAGCAACACATTAACCAAGTTCATGCTATGAATGCAATGCCATCTTCATCTACATCTCCGATTGCTAAAGTAATGCCCTTTGCCAATGCCATGTATTCTAATGCTGGAACAGATGTGTTTTCCTTTGTTCCTAGCCATCAATGGCATTTTCAGGATATGATGCCACATGCAAGGAACAATCTGTGA 1374 0.4192 MDEFSSGDQAPEWTSSSSDDSIYYEDEDSHQGVENTDNIESSIEKDDDKVTTTMLWSSEFDEEVHAYKAYIKYARDMGFVVRKRDLSRDEDVNLNRRYYVCNCQGTRDPKHYRLVDRKRNHKPETRIGCKAHCSVYLDKLSMKWRVKTLEEEHNHPMIPEQFVHLISSYRKLTEADKVRIVCMKEPGFQTSQIVGVLAKLAERVVKEYRNNEFVAQFKSMYSKPVLTTGLDSIEQAAARVYTTEVFVEVKDQLAKVAALKHVGKSGMGSNVVHCVANLDDQRWRKDAKAYLNEEVDDGKDPKRAFSLRVCSPGAPKLNKKFKGLKTRNCSRCGKTGHTRRTCHNVESKKQCSTGDNGSEGQGHGSRFETGRHNSHDDDVVAKQGSLSSKFGLYSTEEQHINQVHAMNAMPSSSTSPIAKVMPFANAMYSNAGTDVFSFVPSHQWHFQDMMPHARNNL* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0743 457 MobiDBLite consensus disorder prediction 347 363 - -
Amo17g0743 457 MobiDBLite consensus disorder prediction 1 20 - -
Amo17g0743 457 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 27 182 - -
Amo17g0743 457 Pfam FAR1 DNA-binding domain 70 158 IPR004330 -
Amo17g0743 457 MobiDBLite consensus disorder prediction 334 377 - -
Amo17g0743 457 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 27 182 - -
Amo17g0743 457 MobiDBLite consensus disorder prediction 23 44 - -
Amo17g0743 457 ProSiteProfiles Zinc finger CCHC-type profile. 329 342 IPR001878 GO:0003676|GO:0008270
Amo17g0743 457 MobiDBLite consensus disorder prediction 1 44 - -
Amo17g0743 457 ProSiteProfiles WRKY domain profile. 84 158 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0743 Amo-Chr17 17314098 17316933 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo17g0743 FAR1 7.8e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0743 - - aip:107606887 412.92