Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0735 AGATCATATATGGAATTCCAAAGTGGAGAGCAGGTTGATAATGTCAAACTTCTGAAAGCTCAAACCCACATATGGAATCATATTTTCAATTTTATAAACTCCATGTCTCTTAAATGTGCTGTTGAGTTGGGCATACCTGATGCCATTCACAATTATGGCCAGCCTATGCCACACTCAAAGCTCATTGCTTCATTGCAAATTCATCCATCAAAAACCTCCTTCATCATTCGCTTGATGAGAATCTTGATCCATTCCGGCTTCTTCGCTACCAAGAATGGTGCTGACAAAGACCTTGAAGTAAGTTATGTTCTAACTGACTCGTCTGTGTTGCTGCTTAAGGGAAACCCTATAAGCATCAGGCCTTTCTTGCTTGTCACGCTTGATCCAATTTTGACAAATCCATGGCATAAATTGTCCACATGGTTCCAAAGTGATAATCCCACACCATTTGAAACGGAACATGGGATCATGTTTTGGAGATATGCTGATCATGAGCCTAAACTTAATGAACTTTTCAATGATGCCATGGCGAGTGATGCTCGATTGGTTAGCAACTTGTTACTTAATGACAAGTGGAAGGGTGTGTTTGAGGGTTTGGAATCATTGGTTGATGTTGGTGGTGGCACAGGAACCGTTGCAAAGGCTATTGCAAAATCATTTCCTGCGTTAGAGTGCACTGTTCTTGATCTCCCACATGTTATTGCTGGCTTGGAAGGAAGTGAAAACCTTAAATATGTTGGAGGGGATATGTTTGAGGTCATTCCTCCCTCTAATGCCATTTTGTTAAAGTGGATTTTGCATGACTGGGAGGACAAGGAATGTTTGAAGATATTGAGGAAATGCAAGGAGGCAATCATGAATAATGGCAGCAAAGGAGGAAAGGTAATTATCATAGATATAGTGATGATGAAGGATGAGAAGAAAGATGATGATGAATCACTTCAAACACAACTCTTCTTTGACATGCAGATGATGGTGTTACACGCTGGCAAGGAGAAAAATGAAAAAGAATGGGTCAAGCTAATATTTTGTGCTGGTTTTAGTGACTACAAGATAACTCCAATTCTTGGACTCAGGTCTCTCATTGAGATATATCCATAG 1101 0.4015 RSYMEFQSGEQVDNVKLLKAQTHIWNHIFNFINSMSLKCAVELGIPDAIHNYGQPMPHSKLIASLQIHPSKTSFIIRLMRILIHSGFFATKNGADKDLEVSYVLTDSSVLLLKGNPISIRPFLLVTLDPILTNPWHKLSTWFQSDNPTPFETEHGIMFWRYADHEPKLNELFNDAMASDARLVSNLLLNDKWKGVFEGLESLVDVGGGTGTVAKAIAKSFPALECTVLDLPHVIAGLEGSENLKYVGGDMFEVIPPSNAILLKWILHDWEDKECLKILRKCKEAIMNNGSKGGKVIIIDIVMMKDEKKDDDESLQTQLFFDMQMMVLHAGKEKNEKEWVKLIFCAGFSDYKITPILGLRSLIEIYP* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0735 366 CDD AdoMet_MTases 202 302 - -
Amo17g0735 366 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 116 364 IPR029063 -
Amo17g0735 366 Gene3D - 7 111 IPR036388 -
Amo17g0735 366 Gene3D Vaccinia Virus protein VP39 113 366 IPR029063 -
Amo17g0735 366 SUPERFAMILY "Winged helix" DNA-binding domain 17 116 IPR036390 -
Amo17g0735 366 Pfam Dimerisation domain 35 82 IPR012967 GO:0046983
Amo17g0735 366 PIRSF O-mtase 3 366 IPR016461 GO:0008168
Amo17g0735 366 PANTHER O-METHYLTRANSFERASE 12 366 IPR016461 GO:0008168
Amo17g0735 366 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 25 366 IPR016461 GO:0008168
Amo17g0735 366 PANTHER ORCINOL O-METHYLTRANSFERASE 12 366 - -
Amo17g0735 366 Pfam O-methyltransferase domain 135 348 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0735 Amo-Chr17 17120211 17122164 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0735 35 352 Monolignol Biosynthesis Gene Families AT5G54160 31.692 2.63e-46 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0735 - K16040 aip:107609507 550.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0735 17 17120211 17122164 Amo17g0735 17 17120211 17122164 ECH