Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0734 ATGGCTTCTTCAAGTGCCTTTCAATGGTTGAGTCTTGTGGGAATCATTTGGCTCCAAGCCATAAATGGAACAAATACAAATTTCCCAGCTTACTCCTCACAACTAAAGCAACTCCTCTCAATATCCCAAGTTCAACTCAACAACCTTGCTTTCGCCTCCGATGCCGGAAAGCTCTTCGGCTTTTTCTCCGGCATGGCGGCGATTTACCTACCCCTTTGGCTTGTCCTAATGATTGGAACAACACTTGGTTTGGTTGGCTATGGTGTCCAATATCTCTTCATAACAAACCAAGTCTCTTCTTTGTCCTATTGGCATGTGTTCTTGCTAACAGTTATAGCCGGAAACAGCATTTGCTGGATCAACACTGTTTGCTATGTTGTCACAATTAGGAACTTCTCTTCTGATCAACAAGTTGCTGTTGGAATCACAACAAGTTACCAAGGATTAAGTGCTAAGATTTATAACACCATTCTTGATGCTATTTCCATGCACAACAAAAATAAAGCTACAATCTTTCTCCTTCTAAACTCTACTATACCATTGATTGTTGGATTAGTAGCTTCTTTTATACTTGGAGAAATTGATGCCACCACAAGGAATAGAAAAATGGGTGTTGGGTTTGTTGTTATGTTTTTCATTACAATTGCAACTGGGGTTTATTCTGTGATCACAAGCTTGGAATTTGTATCTAGCAAGATATCTCAAAAGGGTAACCTTTTTGGTATTATAGTGTCCCTTTTGATCCCTCTATTAGTCCCATTTTCAATGAAGATCAATGAACTCGTTGGATCATGGCAAACAAATAGAGAGAATTCATTAAGGGTATGTGTGGAAGAGAGCAATAATAATAATGAGGTGAAAGAGAGTGAAGATATCACAGAAGATGTTCATGATGATAATGAAGAAGTAATTATTAGTAGAAGTAGAGAAGAGATTGGAGTGATGTTGATGATTAGAAGAATAGATTTTTGGCTATATTTCTTTGTGTATTTCTTTGGTGCAACACTTGGTTTGGTGTTTCTTAATAATTTGGGACAAATTGCTGAGTCAAGGGGTTGCTCTGCCACTTCTTCTTTGGTGTCTTTGTCTTCATCTTTTGGATTCTTTGGAAGGCTCATGCCATCTCTTATGGACTACTTTTACAGGGGCAAGTATGTAATATCAAGACCAGGATCAATGGTAGCAATGATGGCACCAATAGCAGGTGCATTCTTCTTGCTCCTAAACAAAACACACCTAGCCCTATACATAAGCACTGCCATAATTGGAGTGTGCACTGGAGCAATCACTTCAACTTCGGTCTCAACCACAAGTGAGTTATTTGGGACAAACAATTTCTCAGTGAACCATAACGTTGTGGTGGCAAATATTCCAATGGGTTCATTTCTCTTTGGTTACTCTGCTGCACTTGTTTACCATAATGAAGGAAATCGCCAACAACGTTATTATTCTGGGAAGTGTATTGGAATGGAATGTTATAGAGACACTTTTATCGTATGGGGTTGTCTTTGTTGGTTTGGGACTTTGTTGGCTTTGATTTTACATGTTAGAACTCGCAAGTTTTACTCATCACAAAAATGA 1581 0.3858 MASSSAFQWLSLVGIIWLQAINGTNTNFPAYSSQLKQLLSISQVQLNNLAFASDAGKLFGFFSGMAAIYLPLWLVLMIGTTLGLVGYGVQYLFITNQVSSLSYWHVFLLTVIAGNSICWINTVCYVVTIRNFSSDQQVAVGITTSYQGLSAKIYNTILDAISMHNKNKATIFLLLNSTIPLIVGLVASFILGEIDATTRNRKMGVGFVVMFFITIATGVYSVITSLEFVSSKISQKGNLFGIIVSLLIPLLVPFSMKINELVGSWQTNRENSLRVCVEESNNNNEVKESEDITEDVHDDNEEVIISRSREEIGVMLMIRRIDFWLYFFVYFFGATLGLVFLNNLGQIAESRGCSATSSLVSLSSSFGFFGRLMPSLMDYFYRGKYVISRPGSMVAMMAPIAGAFFLLLNKTHLALYISTAIIGVCTGAITSTSVSTTSELFGTNNFSVNHNVVVANIPMGSFLFGYSAALVYHNEGNRQQRYYSGKCIGMECYRDTFIVWGCLCWFGTLLALILHVRTRKFYSSQK* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0734 526 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 3 525 - -
Amo17g0734 526 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 525 - -
Amo17g0734 526 SUPERFAMILY MFS general substrate transporter 6 520 IPR036259 -
Amo17g0734 526 Pfam Nodulin-like 8 254 IPR010658 -
Amo17g0734 526 Gene3D MFS general substrate transporter like domains 261 519 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0734 Amo-Chr17 17051392 17053806 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0734 3 526 Nodulin-like Gene Family AT2G30300 47.547 2.33e-149 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0734 - - gmx:100808034 738.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0734 17 17051392 17053806 Amo17g0734 17 17051392 17053806 ECH
Amo01g0571 01 8345927 8348717 Amo17g0734 17 17051392 17053806 PCT
Amo17g0734 17 17051392 17053806 Amo01g0571 01 8345927 8348717 PCT