Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0732 ATGGCACGTTTTTGCATGTCAATTATTTTAGTTTGCATTATGTTTAGCATTGCATCTTCTGAATTAAGCTCAAATTATTATTACAAAACATGTCCACAAGCACTCTCCATAATAAGAAGTGCAGTGATGAGTGCAGTTGCCAAAGAGCACCGCATGGGTGCATCCTTGCTCCGTCTTCATTTCCATGATTGCTTTGTCAATGGATGTGATGCATCGGTTCTATTAGATGACACATCGAGTTTTACTGGAGAGAAGACAGCTGGTCCGAATGTGAATTCTCTCCGAGGTTTTGATGTAATTGATGACATTAAAACTAAGGTTGAAGCTGCTTGTCCCAGTGTTGTTTCTTGTGCTGATATTCTTGCTCTTGCCGCACGTGATTCTGTTCTTGCATTGGGGGGTCCATCATGGAATGTTGGGTTAGGCAGAAGAGACTCAACGAGTGCAAGTAAAGATGATGCCACTAAAGATATCCCTTCCCCTTTGATGGATCTAAATCAACTTATCTCTGCTTTTTCAAATAAGGGCTTTAACACCAATGAGATGGTTGCCCTCTCAGGAGCTCACACAACAGGGGAAGCCAGATGCCAATTATTTCGAGGAAGGCTTTACAACGAAACAAGCATTGATTCAACTTTGGCAACATCACTGAGGCAGAATTGTCCAAGCACTGGCGGCGATACCAACCTTTCGCCGCTCGATACCACCACCAGTGTCCTATTTGACAATGCCTACTTTAAGAACCTTGTCAACCAAAAAGGGCTTCTACACTCTGATCAGCAACTCTTCAGTGGTGGTTCCACTGATTCTCAGGTCACCAGCTATAGCAACAACCCTGCAAGCTTCTTTGTCGACTTTGCAAACGCCATGGTCAAGATGGCAAACCTTAGCCCTTTGACAGGGAACGACGGCCAAATTCGTACTAACTGTCGCAAAATTAATTAA 945 0.4349 MARFCMSIILVCIMFSIASSELSSNYYYKTCPQALSIIRSAVMSAVAKEHRMGASLLRLHFHDCFVNGCDASVLLDDTSSFTGEKTAGPNVNSLRGFDVIDDIKTKVEAACPSVVSCADILALAARDSVLALGGPSWNVGLGRRDSTSASKDDATKDIPSPLMDLNQLISAFSNKGFNTNEMVALSGAHTTGEARCQLFRGRLYNETSIDSTLATSLRQNCPSTGGDTNLSPLDTTTSVLFDNAYFKNLVNQKGLLHSDQQLFSGGSTDSQVTSYSNNPASFFVDFANAMVKMANLSPLTGNDGQIRTNCRKIN* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0732 314 ProSiteProfiles Plant heme peroxidase family profile. 21 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo17g0732 314 CDD secretory_peroxidase 21 313 IPR033905 GO:0004601|GO:0042744
Amo17g0732 314 Gene3D Peroxidase, domain 2 159 293 - -
Amo17g0732 314 PANTHER PEROXIDASE 72-RELATED 14 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0732 314 Gene3D - 25 311 - -
Amo17g0732 314 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0732 314 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0732 314 PRINTS Plant peroxidase signature 232 247 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0732 314 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0732 314 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0732 314 PRINTS Plant peroxidase signature 248 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0732 314 PRINTS Plant peroxidase signature 288 301 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0732 314 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0732 314 PRINTS Plant peroxidase signature 180 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0732 314 PANTHER PEROXIDASE 14 314 - -
Amo17g0732 314 SUPERFAMILY Heme-dependent peroxidases 21 314 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo17g0732 314 Pfam Peroxidase 39 278 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo17g0732 314 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601
Amo17g0732 314 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo17g0732 314 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo17g0732 314 PRINTS Haem peroxidase superfamily signature 234 249 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo17g0732 314 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo17g0732 314 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0732 Amo-Chr17 17011560 17015655 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0732 17 314 Peroxidase AT5G05340 61.667 2.01e-137 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0732 K00430 - gmx:100794128 517.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0732 17 17011560 17015655 Amo17g0732 17 17011560 17015655 ECH
Amo17g0732 17 17011560 17015655 Amo17g0719 17 16532025 16537117 ECH
Amo11g0099 11 1319234 1322848 Amo17g0732 17 17011560 17015655 PCT
Amo17g0732 17 17011560 17015655 Amo11g0099 11 1319234 1322848 PCT