Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0726 ATGGAAGAGGTTTCTTTGAATTCAATTGTCAACATTTTATATCTTTCAGCAAGAAAACTATCCATGAAGTTCTATTTACCTCTACTGCATCCTTTATTTTTAAGCATTGTTATTCTTTCTCCTCTGGTCTTTGCTGACTTAAGTTCCGATAAGCAAGCCCTTCTTGATTTTGCTGCGGCTATCCCCCACCGTCGCAACCTTCAATGGAATTCATCTACCAAAGTTTGTACATCTTGGGTAGGTGTCACTTGCAATTCGAATGGCACCCGTGTTGTTTCTCTCCGGCTCCCTGGAATTGGACTAGTTGGCACCATCCCGGCTGACACGCTCGGCAAGCTTGATGCTCTTAGAAATCTCAGCCTTCGTTCAAACCTACTCTTTGGAAGCCTACCTGCCGATATTACTTCTCTTCCATTACTCCAAAACCTCTACCTTCAGCATAATAACCTTTCCGGTAATATACCTACCTCATTGCCTCCCCAACTCAATGTACTTGATTTGTCTTACAATTCTTTCTCCGGTGGTATTCCAAAGACACTACAGAATTCAACACAGCTAACAAGATTGAGCCTACAGAACAATTCCCTATCCGGAGAGATACCGAATCTTAATGTTGCTAAGCTTAGGCATTTGAATTTAAGCTACAACCACTTGAATGGCTCTATCCCTCCTGTTCTTAAGAACTTCCCGAATTCTTCCTTTGAAGGGAACTCTCACTTATGTGGATTGCCTCTAAAGCCATGCTCTGTAGCTCCCCCAAGACCTCCGTCAGCGTCACCTCCATCGTCGCCTCTTGTAAGAAAAAGCTCCAAACATAAACTGAGTAAGGCAGCTATAATCGCAATCGCTGTTGGTGGATGCGTGCTTTTGTTGTTTTTAGTTCTTGTCATTGTTCTTTGCTGTTGTTTGAAGAAAAAAGATGATGGAAATGAAAGGCCTAGTAGTGTAAGTAAAGGGAAGGGTCCTAGTGTCGGAGGGAGGAGCGAGAAGCCAAAGGAAGAGTTTGGAAGTGGGGTACAAGAACCTGAGAAGAACAAACTGGTTTTCTTTGAGGGAAGTTCCTATAACTTTGATCTCGAGGATCTGTTGAGGGCTTCGGCTGAAGTTTTGGGGAAGGGTAGTTATGGTACTGCATATAAGGCTGTGTTGGAGGAGTCGACAACTGTCGTGGTTAAACGGTTGAAAGAAGTTGTGGTGAGCAAAAAGGACTTCGAACAGCAGATGGAGATCATAGGAAGAGTCGGACAGCATCCGAATGTGTTGCCACTTCGCGCATATTATTATTCAAAGGACGAGAAGCTTTTGGTTTATGACTATGTCCCAGGTGGCAATTTATCAACACTTTTGCACGGTAATAGATCAAGTGGAAGAACTCCATTAGATTGGGACTCAAGATTAAAACTCTCACTTGGAATTGCCAAAGGAATTGCTCACATACATTCTGTTGGTGGTCCGAAATTCACTCATGGAAATGTCAAAGCCTCGAATGTGCTCATCAGCCAAGAGAATGATGGGAGCATTTCTGATTTCGGCCTGACGCCACTCATGAATGTTCCCACAGCTCCCACTAGAGCTGCAGGCTACCGTGCGCCGGAAGTCATTGAAACCAGGAAGCACACTCATAAATCAGATGTGTACAGTTTCGGTGTCCTCCTTCTTGAAATGCTTACTGGGAAAGCTCCGCCAATGTCTCCAGGACGTGATGATATGGTTGATCTCCCAAGGTGGGTCCAATCGGTCGTTAGGGAGGAGTGGACGGCCGAGGTTTTTGATGTGGAGCTAATGAGGTATCAAAACATTGAAGAAGAAATGGTGCAAATGTTGCAAATTGGCATGGCATGCGTGGCGAAGGTTCCGGATATGAGACCTACCATGGAGGAGGTAGTGAGGATGATAGAAGAGATCCGGCTATCTGACTCCGAGAACCGGCCGTCTTCCGAAGAGAATAAATCCAAGGACTCAAATGTTCAAACTACTCCATGA 1983 0.4468 MEEVSLNSIVNILYLSARKLSMKFYLPLLHPLFLSIVILSPLVFADLSSDKQALLDFAAAIPHRRNLQWNSSTKVCTSWVGVTCNSNGTRVVSLRLPGIGLVGTIPADTLGKLDALRNLSLRSNLLFGSLPADITSLPLLQNLYLQHNNLSGNIPTSLPPQLNVLDLSYNSFSGGIPKTLQNSTQLTRLSLQNNSLSGEIPNLNVAKLRHLNLSYNHLNGSIPPVLKNFPNSSFEGNSHLCGLPLKPCSVAPPRPPSASPPSSPLVRKSSKHKLSKAAIIAIAVGGCVLLLFLVLVIVLCCCLKKKDDGNERPSSVSKGKGPSVGGRSEKPKEEFGSGVQEPEKNKLVFFEGSSYNFDLEDLLRASAEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVSKKDFEQQMEIIGRVGQHPNVLPLRAYYYSKDEKLLVYDYVPGGNLSTLLHGNRSSGRTPLDWDSRLKLSLGIAKGIAHIHSVGGPKFTHGNVKASNVLISQENDGSISDFGLTPLMNVPTAPTRAAGYRAPEVIETRKHTHKSDVYSFGVLLLEMLTGKAPPMSPGRDDMVDLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIGMACVAKVPDMRPTMEEVVRMIEEIRLSDSENRPSSEENKSKDSNVQTTP* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0726 660 MobiDBLite consensus disorder prediction 636 660 - -
Amo17g0726 660 Gene3D Phosphorylase Kinase; domain 1 332 439 - -
Amo17g0726 660 ProSitePatterns Protein kinases ATP-binding region signature. 370 392 IPR017441 GO:0005524
Amo17g0726 660 MobiDBLite consensus disorder prediction 307 339 - -
Amo17g0726 660 MobiDBLite consensus disorder prediction 636 650 - -
Amo17g0726 660 PANTHER OS05G0588300 PROTEIN 15 658 - -
Amo17g0726 660 MobiDBLite consensus disorder prediction 325 339 - -
Amo17g0726 660 Gene3D Ribonuclease Inhibitor 161 249 IPR032675 -
Amo17g0726 660 ProSiteProfiles Leucine-rich repeat profile. 207 229 IPR001611 GO:0005515
Amo17g0726 660 Pfam Leucine rich repeat N-terminal domain 48 85 IPR013210 -
Amo17g0726 660 Pfam Protein kinase domain 367 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0726 660 ProSiteProfiles Protein kinase domain profile. 364 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0726 660 CDD STKc_IRAK 370 635 - -
Amo17g0726 660 Pfam Leucine Rich Repeat 162 182 IPR001611 GO:0005515
Amo17g0726 660 Pfam Leucine Rich Repeat 207 229 IPR001611 GO:0005515
Amo17g0726 660 SUPERFAMILY Protein kinase-like (PK-like) 368 642 IPR011009 -
Amo17g0726 660 PANTHER LRR RECEPTOR-LIKE KINASE 15 658 - -
Amo17g0726 660 Gene3D Transferase(Phosphotransferase) domain 1 440 659 - -
Amo17g0726 660 SUPERFAMILY L domain-like 61 248 - -
Amo17g0726 660 Gene3D Ribonuclease Inhibitor 48 160 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0726 Amo-Chr17 16743554 16747760 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0726 32 657 Receptor kinase-like Gene Family AT5G58300 69.558 0.0 858
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Amo17g0726 Pkinase 3.4e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0726 - - gmx:100818344 1010.36