Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0719 ATGGCGCGAATTTCTTGGAAGTTTGGTTTGTTGATGATGATGGTTGTCCTTGTAGGAAGTTGTTCAGGTCAACTCTCAAATGAGAACTTCTATTCAAAGAAGTGTCCGAATGTGTTTAAAGCAATAAGATCTGTTGTTCGATCTGCTGTTGCTAAAGAACCTCGCATGGCTGCTTCTCTTCTTCGTCTTCACTTTCATGATTGCTTTGTCAATGGTTGTGATGGATCTGTGCTACTTGATGACACATCCTCTTTCAAAGGAGAGAAGACTGCAGGTCCAAACAATAATTCATTGAGAGGCTATGATGTTGTTGATGCCATAAAGGCCAAGGTGGAATCAGTGTGTCCTGGTGTGGTTTCTTGTGCTGATATTCTAGCCATTACAGCTCGAGATTCTGTTGTTCTTCTTGGAGGGCCTAATTGGAATGTAAAACTAGGAAGAAGGGATTCAAAGACAGCAAGCTTGGCAGCTGCAAACAGTGGTGTGCTCCCACCTCCAACTGCTACCCTCAGCCAACTTATCTCCAAGTTTCAAGCTGTAGGCCTCTCTACCAAGGACATGGCTGCCTTATCTGGAGCACACACAATTGGGAAGGCAAGGTGCACTGTCTATAGAACTCGCATATACAATGACACCAACATTGACAGAACATTTGCCAATGCAAGAAAGAAGAATTGTCCAATAATTACTGGAACACCAAAGGACAACAATGTTGCACCCTTGGACTTTAAAACCCCAAACCATTTTGACAACAGCTACTACAGTAATCTCTTGAACAAAAAGGGTCTCCTTCATTCTGACCAAGAACTCTTCAATGGAGGATCCACTGATTCATTGGTTAGGACTTACACAAACAATCAGAAGGCCTTCTTCGCCGACTTCGCGACCGCAATGATTAAGATGGGGAACATCAAACCCTTAACTGGTTCACAAGGGATCATCAGAAGGAACTGTAGGAGAGCAAATTAG 969 0.4324 MARISWKFGLLMMMVVLVGSCSGQLSNENFYSKKCPNVFKAIRSVVRSAVAKEPRMAASLLRLHFHDCFVNGCDGSVLLDDTSSFKGEKTAGPNNNSLRGYDVVDAIKAKVESVCPGVVSCADILAITARDSVVLLGGPNWNVKLGRRDSKTASLAAANSGVLPPPTATLSQLISKFQAVGLSTKDMAALSGAHTIGKARCTVYRTRIYNDTNIDRTFANARKKNCPIITGTPKDNNVAPLDFKTPNHFDNSYYSNLLNKKGLLHSDQELFNGGSTDSLVRTYTNNQKAFFADFATAMIKMGNIKPLTGSQGIIRRNCRRAN* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0719 322 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Amo17g0719 322 Gene3D Peroxidase, domain 2 164 301 - -
Amo17g0719 322 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo17g0719 322 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo17g0719 322 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo17g0719 322 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo17g0719 322 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo17g0719 322 ProSiteProfiles Plant heme peroxidase family profile. 29 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo17g0719 322 SUPERFAMILY Heme-dependent peroxidases 28 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo17g0719 322 Gene3D - 29 319 - -
Amo17g0719 322 PANTHER PEROXIDASE 8 321 - -
Amo17g0719 322 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Amo17g0719 322 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Amo17g0719 322 Pfam Peroxidase 43 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo17g0719 322 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0719 322 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0719 322 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0719 322 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0719 322 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0719 322 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0719 322 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0719 322 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0719 322 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0719 322 PANTHER PEROXIDASE 72-RELATED 8 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0719 322 CDD secretory_peroxidase 24 320 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0719 Amo-Chr17 16532025 16537117 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0719 10 322 Peroxidase AT5G58400 63.898 2.43e-150 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0719 K00430 - tcc:18591067 460.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0719 17 16532025 16537117 Amo17g0719 17 16532025 16537117 ECH
Amo17g0732 17 17011560 17015655 Amo17g0719 17 16532025 16537117 ECH
Amo11g0099 11 1319234 1322848 Amo17g0719 17 16532025 16537117 ECH
Amo11g0097 11 1238410 1243072 Amo17g0719 17 16532025 16537117 PCT
Amo17g0719 17 16532025 16537117 Amo11g0097 11 1238410 1243072 PCT